<div dir="ltr">Thanks Orion. Looking into it...</div><div class="gmail_extra"><br clear="all"><div>David E DeMarle<br>Kitware, Inc.<br>R&D Engineer<br>21 Corporate Drive<br>Clifton Park, NY 12065-8662<br>Phone: 518-881-4909</div>
<br><br><div class="gmail_quote">On Fri, May 31, 2013 at 9:38 AM, Orion Poplawski <span dir="ltr"><<a href="mailto:orion@cora.nwra.com" target="_blank">orion@cora.nwra.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
I'm trying to compile vtk 6.0.0 on Fedora (in preparation for updating the Fedora package) and getting the following:<br>
<br>
Linking CXX executable ../../../../bin/<u></u>vtkIOGeometryCxxTests<br>
cd /export/home/orion/fedora/vtk/<u></u>VTK6.0.0.rc2/build/IO/<u></u>Geometry/Testing/Cxx && /usr/bin/cmake -E cmake_link_script CMakeFiles/<u></u>vtkIOGeometryCxxTests.dir/<u></u>link.txt --verbose=1<br>
/usr/lib64/ccache/c++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_UNICODE -Wno-deprecated -g -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/<u></u>vtkIOGeometryCxxTests.dir/<u></u>vtkIOGeometryCxxTests.cxx.o CMakeFiles/<u></u>vtkIOGeometryCxxTests.dir/<u></u>TestSimplePointsReaderWriter.<u></u>cxx.o CMakeFiles/<u></u>vtkIOGeometryCxxTests.dir/<u></u>TestWindBladeReader.cxx.o -o ../../../../bin/<u></u>vtkIOGeometryCxxTests -L/usr/lib/jvm/java/jre/lib/<u></u>amd64/xawt -L/usr/lib/jvm/java/jre/lib/<u></u>amd64/client -L/usr/lib/jvm/java/jre/lib/<u></u>amd64/server -rdynamic ../../../../lib/<u></u>libvtkFiltersGeometry-6.0.so.1 ../../../../lib/<u></u>libvtkFiltersCore-6.0.so.1 ../../../../lib/<u></u>libvtkCommonExecutionModel-6.<u></u>0.so.1 ../../../../lib/<u></u>libvtkCommonDataModel-6.0.so.1 ../../../../lib/<u></u>libvtkCommonMath-6.0.so.1 ../../../../lib/<u></u>libvtkCommonCore-6.0.so.1 ../../../../lib/libvtksys-6.0.<u></u>so.1 ../../../../lib/<u></u>libvtkCommonMisc-6.0.so.1 ../../../../lib/<u></u>libvtkCommonSystem-6.0.so.1 ../../../../lib/<u></u><a href="http://libvtkCommonTransforms-6.0.so" target="_blank">libvtkCommonTransforms-6.0.so</a>.<u></u>1 ../../../../lib/libvtkIOAMR-6.<u></u>0.so.1 ../../../../lib/<u></u>libvtkFiltersAMR-6.0.so.1 ../../../../lib/<u></u>libvtkFiltersGeneral-6.0.so.1 ../../../../lib/<u></u>libvtkCommonComputationalGeome<u></u>try-6.0.so.1 ../../../../lib/<u></u>libvtkParallelCore-6.0.so.1 ../../../../lib/<u></u>libvtkIOLegacy-6.0.so.1 ../../../../lib/libvtkIOCore-<u></u>6.0.so.1 -lz -lrt -lm -lhdf5_hl -lhdf5 ../../../../lib/libvtkjsoncpp-<u></u>6.0.so.1 ../../../../lib/<u></u><a href="http://libvtkInteractionStyle-6.0.so" target="_blank">libvtkInteractionStyle-6.0.so</a>.<u></u>1 ../../../../lib/<u></u>libvtkRenderingCore-6.0.so.1 ../../../../lib/<u></u>libvtkFiltersExtraction-6.0.<u></u>so.1 ../../../../lib/<u></u>libvtkFiltersStatistics-6.0.<u></u>so.1 ../../../../lib/<u></u>libvtkImagingFourier-6.0.so.1 ../../../../lib/<u></u>libvtkImagingCore-6.0.so.1 ../../../../lib/libvtkalglib-<u></u>6.0.so.1 ../../../../lib/<u></u>libvtkFiltersSources-6.0.so.1 ../../../../lib/libvtkIOImage-<u></u>6.0.so.1 ../../../../lib/<u></u>libvtkDICOMParser-6.0.so.1 ../../../../lib/libvtkmetaio-<u></u>6.0.so.1 -ljpeg -lpng -ltiff ../../../../lib/<u></u>libvtkIOXMLParser-6.0.so.1 -lexpat ../../../../lib/<u></u>libvtkRenderingOpenGL-6.0.so.1 ../../../../lib/<u></u>libvtkImagingHybrid-6.0.so.1 ../../../../lib/<u></u><a href="http://libvtkTestingRendering-6.0.so" target="_blank">libvtkTestingRendering-6.0.so</a>.<u></u>1 -lGLU -lGL -lSM -lICE -lX11 -lXext -lSM -lICE -lX11 -lXext -lXt ../../../../lib/<u></u>libvtkRenderingCore-6.0.so.1 ../../../../lib/<u></u>libvtkFiltersGeometry-6.0.so.1 ../../../../lib/<u></u>libvtkFiltersExtraction-6.0.<u></u>so.1 ../../../../lib/<u></u>libvtkFiltersStatistics-6.0.<u></u>so.1 ../../../../lib/<u></u>libvtkImagingFourier-6.0.so.1 ../../../../lib/libvtkalglib-<u></u>6.0.so.1 ../../../../lib/<u></u>libvtkFiltersSources-6.0.so.1 ../../../../lib/<u></u>libvtkFiltersGeneral-6.0.so.1 ../../../../lib/<u></u>libvtkFiltersCore-6.0.so.1 ../../../../lib/<u></u>libvtkCommonComputationalGeome<u></u>try-6.0.so.1 ../../../../lib/libvtkIOImage-<u></u>6.0.so.1 ../../../../lib/<u></u>libvtkDICOMParser-6.0.so.1 ../../../../lib/libvtkmetaio-<u></u>6.0.so.1 -ljpeg -lpng -ltiff ../../../../lib/<u></u>libvtkIOXMLParser-6.0.so.1 ../../../../lib/libvtkIOCore-<u></u>6.0.so.1 -lz -lexpat ../../../../lib/<u></u>libvtkImagingCore-6.0.so.1 ../../../../lib/<u></u>libvtkCommonExecutionModel-6.<u></u>0.so.1 ../../../../lib/<u></u>libvtkCommonDataModel-6.0.so.1 ../../../../lib/<u></u>libvtkCommonMisc-6.0.so.1 ../../../../lib/<u></u>libvtkCommonSystem-6.0.so.1 ../../../../lib/<u></u><a href="http://libvtkCommonTransforms-6.0.so" target="_blank">libvtkCommonTransforms-6.0.so</a>.<u></u>1 ../../../../lib/<u></u>libvtkCommonMath-6.0.so.1 ../../../../lib/<u></u>libvtkCommonCore-6.0.so.1 ../../../../lib/libvtksys-6.0.<u></u>so.1 -ldl -Wl,-rpath,/usr/lib/jvm/java/<u></u>jre/lib/amd64/xawt:/usr/lib/<u></u>jvm/java/jre/lib/amd64/client:<u></u>/usr/lib/jvm/java/jre/lib/<u></u>amd64/server:/export/home/<u></u>orion/fedora/vtk/VTK6.0.0.rc2/<u></u>build/lib <br>
CMakeFiles/<u></u>vtkIOGeometryCxxTests.dir/<u></u>TestWindBladeReader.cxx.o: In function `vtkSmartPointer<<u></u>vtkWindBladeReader>::New()':<br>
/export/home/orion/fedora/vtk/<u></u>VTK6.0.0.rc2/Common/Core/<u></u>vtkSmartPointer.h:113: undefined reference to `vtkWindBladeReader::New()'<br>
CMakeFiles/<u></u>vtkIOGeometryCxxTests.dir/<u></u>TestWindBladeReader.cxx.o: In function `TestWindBladeReader(int, char**)':<br>
/export/home/orion/fedora/vtk/<u></u>VTK6.0.0.rc2/IO/Geometry/<u></u>Testing/Cxx/<u></u>TestWindBladeReader.cxx:132: undefined reference to `vtkWindBladeReader::<u></u>GetFieldOutput()'<br>
collect2: error: ld returned 1 exit status<br>
make[2]: *** [bin/vtkIOGeometryCxxTests] Error 1<br>
<br>
It looks like it is not getting linked to libvtkIOGeometry but should. Not sure how to fix this.<br>
<br>
Configuration:<br>
<br>
+ CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=ge<br>
neric -D_UNICODE'<br>
+ export CFLAGS<br>
+ CXXFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=<br>
generic -D_UNICODE'<br>
+ export CXXFLAGS<br>
+ FFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=ge<br>
neric -I/usr/lib64/gfortran/modules'<br>
+ export FFLAGS<br>
+ FCFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=g<br>
eneric -I/usr/lib64/gfortran/modules'<br>
+ export FCFLAGS<br>
+ LDFLAGS='-Wl,-z,relro '<br>
+ export LDFLAGS<br>
+ /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:<u></u>STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:<u></u>STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELE<br>
ASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=<u></u>ON -DCMAKE_INSTALL_PREFIX:PATH=/<u></u>usr -DINCLUDE_INSTALL_DIR:PATH=/<u></u>usr/include<br>
-DLIB_INSTALL_DIR:PATH=/usr/<u></u>lib64 -DSYSCONF_INSTALL_DIR:PATH=/<u></u>etc -DSHARE_INSTALL_PREFIX:PATH=/<u></u>usr/share -DLIB_SUFFIX=64 -DB<br>
UILD_SHARED_LIBS:BOOL=ON .. -DBUILD_DOCUMENTATION:BOOL=ON -DBUILD_EXAMPLES:BOOL=ON -DBUILD_TESTING:BOOL=ON -DVTK_INSTALL_INCL<br>
UDE_DIR:PATH=/include/vtk -DVTK_INSTALL_LIB_DIR:PATH=/<u></u>lib64/vtk -DTK_INTERNAL_PATH:PATH=/usr/<u></u>include/tk-private/generic '-DVT<br>
K_PYTHON_SETUP_ARGS=--prefix=/<u></u>usr --root=/export/home/orion/<u></u>redhat/BUILDROOT/vtk-6.0.0-0.<u></u>1.rc2.fc18.x86_64' -DVTK_WRAP_PYTHON<br>
:BOOL=ON -DVTK_WRAP_JAVA:BOOL=ON -DJAVA_INCLUDE_PATH:PATH=/usr/<u></u>lib/jvm/java/include -DJAVA_INCLUDE_PATH2:PATH=/<u></u>usr/lib/jvm/ja<br>
va/include/linux -DJAVA_AWT_INCLUDE_PATH:PATH=/<u></u>usr/lib/jvm/java/include -DVTK_WRAP_TCL:BOOL=ON -DVTK_Group_Imaging:BOOL=ON -D<br>
VTK_Group_Qt:BOOL=ON -DVTK_Group_Rendering:BOOL=ON -DVTK_Group_StandAlone:BOOL=ON -DVTK_Group_Tk:BOOL=ON -DVTK_Group_Views:BO<br>
OL=ON -DVTK_USE_OGGTHEORA_ENCODER=ON -DVTK_USE_SYSTEM_LIBRARIES=ON -DVTK_USE_SYSTEM_LIBPROJ4=OFF<br>
<br>
-- <br>
Orion Poplawski<br>
Technical Manager <a href="tel:303-415-9701%20x222" value="+13034159701" target="_blank">303-415-9701 x222</a><br>
NWRA/CoRA Division FAX: <a href="tel:303-415-9702" value="+13034159702" target="_blank">303-415-9702</a><br>
3380 Mitchell Lane <a href="mailto:orion@cora.nwra.com" target="_blank">orion@cora.nwra.com</a><br>
Boulder, CO 80301 <a href="http://www.cora.nwra.com" target="_blank">http://www.cora.nwra.com</a><br>
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</blockquote></div><br></div>