TubeTK/Slicer

__NOTITLE__

Home About Image Gallery Data and Publications For Users Installation Methods & Apps TubeTK with 3D Slicer TubeTK with OsiriX For Developers Development Docs Report Bugs Request Features Contact Us

TubeTK in 3D Slicer Overview Slicer 3D is the recommended platform for using TubeTK. Using TubeTK stand-alone from the command-line is also well supported. You must first install Slicer, and then build TubeTK using that installed version of Slicer to provide the dependencies for TubeTK (e.g., ITK, VTK, CTK). Details Get CMake Install the current stable release of CMake Download binaries from http://www.cmake.org Get 3D Slicer Install the current stable release of Slicer Download 3D Slicer Binaries: from http://download.slicer.org/ Or, build 3D Slicer from source: Slicer4 Build Instructions Configuration recommendations: In CMake, turn-on advanced options and change BUILD_TYPE to Release In CMake, change Slicer_USE_PYTHONQT_WITH_TCL to OFF Get Boost (optional) Boost is used by select TubeTK applications. Boost must be built from source to resolve linking errors on 64 bit machines on current binaries for Boost Version 1.54 or later is needed Download from http://www.boost.org/ Build TubeTK using Slicer TubeTK will use Slicer's ITK, VTK, and other libraries during its build process, to ensure compatibility with Slicer. In CMake, set the following options BUILD_TYPE = Release USE_SLICER_MODULES = True Configure Slicer to load TubeTK's modules Run Slicer Edit -> Application Settings -> Modules -> Additional module paths (click >> to the right of the box, then the Add button) Select <YourTubeTKBuildDirectory>/TubeTK-Build/lib/TubeTK/Plugins/ Restart Slicer Restart 3D Slicer On restart, the TubeTK modules will now be in the list of modules. All TubeTK module names end with (TubeTK)