ITK/Tcons/Agendas/2010 12 21: Difference between revisions
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# itkMetaImageIOTest http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001616 | # itkMetaImageIOTest http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001616 | ||
== ITKv4-A03 == | One patch for metaObject in Gerrit | ||
* http://review.source.kitware.com/#change,590 | |||
==Schedule== | |||
===ITKv4-A03 === | |||
* Was tagged. | * Was tagged. | ||
** http://itk.org/gitweb?p=ITK.git;a=tag;h=e98c2f22feceea2ea3481e83e9b01dae9a67d19e | |||
== ITKv4-A04 == | === ITKv4-A04 === | ||
* Date: January 7th | * Date: January 7th | ||
===Major topics to be | ====Major topics to be merged ==== | ||
* Fixing Windows 64bits problem with "long"... | * Fixing Windows 64bits problem with "long"... | ||
** Patch submitted to Gerrit: http://review.source.kitware.com/#change,578 | |||
* Data class additions/hierarchies? | * Data class additions/hierarchies? | ||
* TimeStamps? | * TimeStamps? | ||
== ITKv4 A05 == | === ITKv4 A05 === | ||
* Date: January 28th ( hard deadline before Winter Design Meeting ) | * Date: January 28th ( hard deadline before Winter Design Meeting ) | ||
=== Major topics to be completed=== | ==== Major topics to be completed==== | ||
* GPU Draft Implementation | * GPU Draft Implementation | ||
* SimpleITK Draft Implementation | * SimpleITK Draft Implementation | ||
| Line 128: | Line 134: | ||
[[ITK_Release_4/Data_Collection|Data Collection]] | [[ITK_Release_4/Data_Collection|Data Collection]] | ||
=== Use Cases === | |||
==== Cone Beam CT ==== | |||
* Use case with Cone Beam CT datasets uploaded to [http://midas.kitware.com/ MIDAS]. | |||
* Downloading through web interface is at the item level, for larger data sets (collections/communities) kitware is developing a desktop application. | |||
==== BrainWeb ==== | |||
Gerrit patch intended to facilitate the use of BrainWeb datasets: | |||
http://review.source.kitware.com/#change,605 | |||
== Migration Guide Process == | == Migration Guide Process == | ||
Latest revision as of 15:54, 21 December 2010
How to Join the Tcon
Number to Call
- 1-800-728-9607 (in the US) or
- +1 9139049873 (international)
- access code 6815251
Webex
- Meeting link
- https://emeetings.webex.com/emeetings/j.php?ED=138191182&UID=482060457&PW=NNzJiNDk1ZGU3
Project Management
February Meeting in Boston
- Set for February 2-3, 2011 in Boston at Harvard Medical School.
Please register for the meeting ASAP. Here is the link for the registration:
Changing Tcon Day/Time
We ran a survey:
Wednesday at 10am EST seems to be the time that matches all the people who responded the survey.
Technical Topics
Dashboard
- Dashboard Status - Today's Dashboard
Lingering Failing Tests ( Feet + Heat )
- DICOM Tests tkGDCMSeriesStreamReadImageWrite3 and tkGDCMSeriesStreamReadImageWrite4
- Malaterre/Roden status update
- Able to reproduce the problem?
- resolution?
- LabelMap tests failing on certain Windows systems
- http://www.cdash.org/CDash/viewTest.php?onlyfailed&buildid=805695
- Who is responsible to address?
- KWStyle failing
FFT related failureCompleted- Add KWStyle tests to CDash@Home
JPEG2000 on BigEndian- Kitware/Harvard/Malaterre status update
- Anticipated resolution? Completed
VXL vcl-test_atomic_count- Kitware status update? Completed
New Year's Resolutions
- Bring Valgrind errors to Zero.
- Almost 1/2 of the defective tests are meta related - 15 out of 31 failing tests
- itkMetaArrowConverterTest http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001634
- itkGE4 http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001633
- itkSiemans http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001632
- itkGE4 http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001633
- itkGEAdw http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001631
- itkGE5 http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001630
- itkReadWriteSpatialObjectTest1 http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001629
- testMetaLine http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001627
- itkImageFileReaderDimensionsTest_MHD http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001625
- itkMetaImageStreamingWriterIOTest http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001624
- itkImageFileWriterPastingTest1 http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001620
- itkReadWriteImageWithDictionaryTest1 http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001619
- itkMetaImageIOMetaDataTest http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001618
- itkMetaImageStreamingWriterIOTest2 http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001617
- itkMetaImageIOTest http://www.cdash.org/CDash/viewDynamicAnalysisFile.php?id=1001616
One patch for metaObject in Gerrit
Schedule
ITKv4-A03
ITKv4-A04
- Date: January 7th
Major topics to be merged
- Fixing Windows 64bits problem with "long"...
- Patch submitted to Gerrit: http://review.source.kitware.com/#change,578
- Data class additions/hierarchies?
- TimeStamps?
ITKv4 A05
- Date: January 28th ( hard deadline before Winter Design Meeting )
Major topics to be completed
- GPU Draft Implementation
- SimpleITK Draft Implementation
Outreach
- MICCAI 2011 Call for Workshops and Tutorials
- Note that we already have an accepted tutorial for CVPR 2011 on the use of ITK+OpenCV
Redmine demo
- Project management software
- SimpleITK Redmine instance on EC2
Gerrit Reviews
Doxygen Nightly
ITK Data
We had a tcon on December 16th.
Summary here:
Use Cases
Cone Beam CT
- Use case with Cone Beam CT datasets uploaded to MIDAS.
- Downloading through web interface is at the item level, for larger data sets (collections/communities) kitware is developing a desktop application.
BrainWeb
Gerrit patch intended to facilitate the use of BrainWeb datasets:
http://review.source.kitware.com/#change,605
Migration Guide Process
- Users Migration Guide (Gabe Hart)
- Example XML
Simple ITK
- Code generations
- Using Lua and JSON
- Interfacing to
- ImageJ / Fiji
- CellProfiler
GPU
- Summary of tcon with NVIDIA from Monday Nov 22 at 1pm EST (Won Ki)
- GPU Acceleration - V4
DICOM
Dan and Mathieu to report
- Beginnings of a requirements document. Comments welcome.
- Proposed TConf
Image Registration Revision
- Start sending patches to Gerrit
- New CompositeTransform class is underway
- New DeformationFieldTransform class is underway
- Transform IO will be adjusted accordingly
Level Set
- Refactoring page
Time Stamp Proposal
Modularization
- Had a Tcon about modularization on Dec 3 [1].
The initial partition seems to be good to start with.
- Brad King worked on cmake packaging prototypes
- Xiaoxiao Liu (Kitware) is working on scripts to migrate monolithic ITK to modular ITK
TIFF Update
- Brad King addressed the int issues
- Currently at
git fetch git://kwsource.kitwarein.com/~bradking/itk/bradkings-itk.git +libtiff4beta6:libtiff4beta6
Sequestered Reference Applications
We have already made significant changes, and they are not being recorded yet. It is time to setup these reference applications.
Ongoing
- V3D Plugins
- Slicer
- VV
- Insight Applications now submitting
- Broken: need to use it as an example for the Migration Guide.
Development Versions following ITKv4
- OTB
- GoFigure2
- Nightly build use the current ITKv4.
- http://my.cdash.org/index.php?project=GoFigure2
Pending
- IGSTK, after SPIE'11 (IGSTK5.0)
- Insight Applications (ITKApps from v3.20)
- ITK tests from v3.20
Wrapping
- Status (Alex)
- Wrapping
ITK Readers for Microscopy formats
- There's a need for readers in the microscopy community in order to be able to use ITK
- Zeiss (LSM and ZVI)
- Leica (LIF)
- Olympus (OIB)
- Nikon ()
- BioFormats has readers and example files for these. It is Java with C++ bindings for ITK, BUT it's GPL.
