TubeTK/Slicer

TubeTK in 3D Slicer

• Note that these instructions are under development
• Please use Slicer4
• Note that there are different instructions for users and developers

Users

Download 3D Slicer

• Download from http://www.slicer.org/pages/Special:SlicerDownloads
• Select "Type of Download": Snapshots
• Choose your operating system: Windows, Mac OS X, Linux or Solaris
• File to download: Slicer3-4.0.alpha

Add TubeTK's Command Line Modules

• Copy all of the TubeTK plugins to Slicer's plugins directory:

cp <YourTubeTKBuildDirectory>/TubeTK-Build/lib/TubeTK/Plugins/* <YourSlicerDirectory>/lib/Slicer3/Plugins

Run 3D Slicer

cd <YourSlicerDirectory>
./Slicer3

• The TubeTK modules will now be in the list of modules

Developers

Build 3D Slicer

• Build Slicer4 according to the Slicer4 Build Instructions

Add TubeTK's Command Line Modules

• Copy all of the TubeTK plugins to Slicer's plugins directory:

mkdir <YourSlicerDirectory>/Slicer-build/lib/Slicer3/Plugins/TubeTK
cp <YourTubeTKBuildDirectory>/TubeTK-Build/lib/TubeTK/Plugins/* <YourSlicerDirectory>/Slicer-build/lib/Slicer3/Plugins/TubeTK

Run 3D Slicer

cd <YourSlicerBuildDirectory>/Slicer-build
./Slicer

• The TubeTK modules will now be in the list of modules