SimpleITK/Tcon 2011 4 27

Tcon Information

Phone Line:

  Please join the following teleconference line:
      Toll-Free #:      1-800-704-9804 
      International #:  1-404-920-6604
      Participant Code: 61466276

  Wednesday, April  20th, 9:30am Eastern Time

http://readytalk.com

Attendees

• Dan Blezek
• Brad Lowekamp
• Gabe Hart
• Luis Ibanez

Links

• CDASH: http://www.cdash.org/CDash/index.php?project=Insight#ITKv4_SimpleITK
  • Failing tests: http://www.cdash.org/CDash/viewTest.php?onlyfailed&buildid=967581
• GITHUB: https://github.com/SimpleITK/SimpleITK/network
• DOXYGEN: http://erie.nlm.nih.gov/~blowek1/SimpleITK/index.html
• JIRA: https://itk.icts.uiowa.edu/jira/browse/SIMPLEITK

Daily Details

Currently Open Topics In next

• 49-GeometryTransforms
  • Good to Go?
• SIMPLEITK-1_registration
  • Failing Test

Other Open Topics

• How should we generate binary Masks?
  • uint8 and 255?
  • This works well for binary morphology

• Several issues related to integer types C99 vs int?
  • Need to adopt a convention and be consistent across systems and languages.
  • Needed for GetPixel and GetBuffer methods.
  • 37-stdintForSWIG

• 40-ConnectingSimpleITKImageTOJava

• 11-AddingFFTs
  • Should Geatan's IJ paper be move into ITK?
  • How do we generate kernels? For both FFTs and convolution filters?

• 49-GeometryTransforms
  • How do we specify Regions?

• AddingOperators
  • Implemented in C++
  • Partially implemented in Python
  • What other languages would benefit operators?

• Test drivers need work
  • Can we reuse ITK's?
  • They currently don't work with Valgrind due to sub processes

• CMake
  • Shared Libraries
  • Installation
  • R, C#
  • Update to best CMake practices

Review JIRA Issues

Any Blocking issues which need to be addressed?

Schedule

Discuss long term goals and milestones.

• Documentations
  • Luis to begin Slide Documentation
    • Getting started guide
    • Users Guide
  • How to populate Doxygen

• Automate Script to List filters wrapped
  • This script should take as input a list of ITK Modules or Directories, for each modual determine which filters are implemented in SimpleITK
  • Additional input would include filter/files to exclude
  • Output could be a dox file, so that it could be a doxygen related page

• Registration is very important

Users

• ImageJDev/FIJI hackathon: Jan 29th - Feb 11th
  • Integrate ITK with ImageJ
  • Integrate ITK with CellProfiler
• ImageJDev image is 5D (x,y,z,t,channel)
  • Internal class ImagePlus use Java arrays