| AbortExecute | vtkAlgorithm | |
| AbortExecuteOff() | vtkAlgorithm | virtual |
| AbortExecuteOn() | vtkAlgorithm | virtual |
| AddInputConnection(int port, vtkAlgorithmOutput *input) | vtkAlgorithm | virtual |
| AddInputConnection(vtkAlgorithmOutput *input) | vtkAlgorithm | virtual |
| AddInputData(vtkDataObject *) | vtkPolyDataAlgorithm | |
| AddInputData(int, vtkDataObject *) | vtkPolyDataAlgorithm | |
| AddInputDataInternal(int port, vtkDataObject *input) | vtkAlgorithm | inlineprotected |
| AddInputDataObject(int port, vtkDataObject *data) | vtkAlgorithm | virtual |
| AddInputDataObject(vtkDataObject *data) | vtkAlgorithm | inlinevirtual |
| AddObserver(unsigned long event, vtkCommand *, float priority=0.0f) | vtkObject | |
| AddObserver(const char *event, vtkCommand *, float priority=0.0f) | vtkObject | |
| AddObserver(unsigned long event, U observer, void(T::*callback)(), float priority=0.0f) | vtkObject | inline |
| AddObserver(unsigned long event, U observer, void(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f) | vtkObject | inline |
| AddObserver(unsigned long event, U observer, bool(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f) | vtkObject | inline |
| AtomType | vtkMoleculeReaderBase | protected |
| AtomTypeStrings | vtkMoleculeReaderBase | protected |
| BreakOnError() | vtkObject | static |
| BScale | vtkMoleculeReaderBase | protected |
| CAN_HANDLE_PIECE_REQUEST() | vtkAlgorithm | static |
| CAN_PRODUCE_SUB_EXTENT() | vtkAlgorithm | static |
| CanReadFile(const char *name) | vtkXYZMolReader | virtual |
| Chain | vtkMoleculeReaderBase | protected |
| CollectRevisions(ostream &) | vtkObjectBase | inlineprotectedvirtual |
| ComputePipelineMTime(vtkInformation *request, vtkInformationVector **inInfoVec, vtkInformationVector *outInfoVec, int requestFromOutputPort, vtkMTimeType *mtime) | vtkAlgorithm | virtual |
| ConvertTotalInputToPortConnection(int ind, int &port, int &conn) | vtkAlgorithm | |
| CreateDefaultExecutive() | vtkAlgorithm | protectedvirtual |
| Debug | vtkObject | protected |
| DebugOff() | vtkObject | virtual |
| DebugOn() | vtkObject | virtual |
| DEFAULT_PRECISION enum value | vtkAlgorithm | |
| DefaultExecutivePrototype | vtkAlgorithm | protectedstatic |
| Delete() | vtkObjectBase | virtual |
| DesiredOutputPrecision enum name | vtkAlgorithm | |
| DOUBLE_PRECISION enum value | vtkAlgorithm | |
| ErrorCode | vtkAlgorithm | protected |
| FastDelete() | vtkObjectBase | virtual |
| FileName | vtkMoleculeReaderBase | protected |
| FillInputPortInformation(int port, vtkInformation *info) override | vtkPolyDataAlgorithm | protectedvirtual |
| FillOutputPortInformation(int, vtkInformation *) | vtkMoleculeReaderBase | protectedvirtual |
| GetAbortExecute() | vtkAlgorithm | virtual |
| GetAtom(const char *line, char *atom, float *x) | vtkXYZMolReader | protected |
| GetBScale() | vtkMoleculeReaderBase | virtual |
| GetClassName() const | vtkObjectBase | |
| GetCommand(unsigned long tag) | vtkObject | |
| GetDebug() | vtkObject | |
| GetErrorCode() | vtkAlgorithm | virtual |
| GetExecutive() | vtkAlgorithm | |
| GetFileName() | vtkMoleculeReaderBase | virtual |
| GetGlobalWarningDisplay() | vtkObject | static |
| GetHBScale() | vtkMoleculeReaderBase | virtual |
| GetInformation() | vtkAlgorithm | virtual |
| GetInput() | vtkPolyDataAlgorithm | |
| GetInput(int port) | vtkPolyDataAlgorithm | |
| GetInputAbstractArrayToProcess(int idx, vtkInformationVector **inputVector) | vtkAlgorithm | protected |
| GetInputAbstractArrayToProcess(int idx, vtkInformationVector **inputVector, int &association) | vtkAlgorithm | protected |
| GetInputAbstractArrayToProcess(int idx, int connection, vtkInformationVector **inputVector) | vtkAlgorithm | protected |
| GetInputAbstractArrayToProcess(int idx, int connection, vtkInformationVector **inputVector, int &association) | vtkAlgorithm | protected |
| GetInputAbstractArrayToProcess(int idx, vtkDataObject *input) | vtkAlgorithm | protected |
| GetInputAbstractArrayToProcess(int idx, vtkDataObject *input, int &association) | vtkAlgorithm | protected |
| GetInputAlgorithm(int port, int index, int &algPort) | vtkAlgorithm | |
| GetInputAlgorithm(int port, int index) | vtkAlgorithm | |
| GetInputAlgorithm() | vtkAlgorithm | inline |
| GetInputArrayAssociation(int idx, vtkInformationVector **inputVector) | vtkAlgorithm | protected |
| GetInputArrayAssociation(int idx, int connection, vtkInformationVector **inputVector) | vtkAlgorithm | protected |
| GetInputArrayAssociation(int idx, vtkDataObject *input) | vtkAlgorithm | protected |
| GetInputArrayFieldInformation(int idx, vtkInformationVector **inputVector) | vtkAlgorithm | protected |
| GetInputArrayInformation(int idx) | vtkAlgorithm | |
| GetInputArrayToProcess(int idx, vtkInformationVector **inputVector) | vtkAlgorithm | protected |
| GetInputArrayToProcess(int idx, vtkInformationVector **inputVector, int &association) | vtkAlgorithm | protected |
| GetInputArrayToProcess(int idx, int connection, vtkInformationVector **inputVector) | vtkAlgorithm | protected |
| GetInputArrayToProcess(int idx, int connection, vtkInformationVector **inputVector, int &association) | vtkAlgorithm | protected |
| GetInputArrayToProcess(int idx, vtkDataObject *input) | vtkAlgorithm | protected |
| GetInputArrayToProcess(int idx, vtkDataObject *input, int &association) | vtkAlgorithm | protected |
| GetInputConnection(int port, int index) | vtkAlgorithm | |
| GetInputDataObject(int port, int connection) | vtkAlgorithm | |
| GetInputExecutive(int port, int index) | vtkAlgorithm | |
| GetInputExecutive() | vtkAlgorithm | inline |
| GetInputInformation(int port, int index) | vtkAlgorithm | |
| GetInputInformation() | vtkAlgorithm | inline |
| GetInputPortInformation(int port) | vtkAlgorithm | |
| GetLine1(const char *line, int *cnt) | vtkXYZMolReader | protected |
| GetLine2(const char *line, char *name) | vtkXYZMolReader | protected |
| GetMaxTimeStep() | vtkXYZMolReader | virtual |
| GetMTime() | vtkObject | virtual |
| GetNextLine(FILE *fp, char *line, int maxlen) | vtkXYZMolReader | protected |
| GetNumberOfAtoms() | vtkMoleculeReaderBase | virtual |
| GetNumberOfInputConnections(int port) | vtkAlgorithm | |
| GetNumberOfInputPorts() | vtkAlgorithm | |
| GetNumberOfOutputPorts() | vtkAlgorithm | |
| GetOutput() | vtkPolyDataAlgorithm | |
| GetOutput(int) | vtkPolyDataAlgorithm | |
| GetOutputDataObject(int port) | vtkAlgorithm | |
| GetOutputInformation(int port) | vtkAlgorithm | |
| GetOutputPort(int index) | vtkAlgorithm | |
| GetOutputPort() | vtkAlgorithm | inline |
| GetOutputPortInformation(int port) | vtkAlgorithm | |
| GetPolyDataInput(int port) | vtkPolyDataAlgorithm | |
| GetProgress() | vtkAlgorithm | virtual |
| GetProgressObserver() | vtkAlgorithm | virtual |
| GetProgressText() | vtkAlgorithm | virtual |
| GetReferenceCount() | vtkObjectBase | inline |
| GetReleaseDataFlag() | vtkAlgorithm | virtual |
| GetTimeStep() | vtkXYZMolReader | virtual |
| GetTotalNumberOfInputConnections() | vtkAlgorithm | |
| GetUpdateExtent() | vtkAlgorithm | inline |
| GetUpdateExtent(int port) | vtkAlgorithm | |
| GetUpdateExtent(int &x0, int &x1, int &y0, int &y1, int &z0, int &z1) | vtkAlgorithm | inline |
| GetUpdateExtent(int port, int &x0, int &x1, int &y0, int &y1, int &z0, int &z1) | vtkAlgorithm | |
| GetUpdateExtent(int extent[6]) | vtkAlgorithm | inline |
| GetUpdateExtent(int port, int extent[6]) | vtkAlgorithm | |
| GetUpdateGhostLevel() | vtkAlgorithm | inline |
| GetUpdateGhostLevel(int port) | vtkAlgorithm | |
| GetUpdateNumberOfPieces() | vtkAlgorithm | inline |
| GetUpdateNumberOfPieces(int port) | vtkAlgorithm | |
| GetUpdatePiece() | vtkAlgorithm | inline |
| GetUpdatePiece(int port) | vtkAlgorithm | |
| GlobalWarningDisplayOff() | vtkObject | inlinestatic |
| GlobalWarningDisplayOn() | vtkObject | inlinestatic |
| HasExecutive() | vtkAlgorithm | |
| HasObserver(unsigned long event, vtkCommand *) | vtkObject | |
| HasObserver(const char *event, vtkCommand *) | vtkObject | |
| HasObserver(unsigned long event) | vtkObject | |
| HasObserver(const char *event) | vtkObject | |
| HBScale | vtkMoleculeReaderBase | protected |
| Information | vtkAlgorithm | protected |
| InitializeObjectBase() | vtkObjectBase | |
| INPUT_ARRAYS_TO_PROCESS() | vtkAlgorithm | static |
| INPUT_CONNECTION() | vtkAlgorithm | static |
| INPUT_IS_OPTIONAL() | vtkAlgorithm | static |
| INPUT_IS_REPEATABLE() | vtkAlgorithm | static |
| INPUT_PORT() | vtkAlgorithm | static |
| INPUT_REQUIRED_DATA_TYPE() | vtkAlgorithm | static |
| INPUT_REQUIRED_FIELDS() | vtkAlgorithm | static |
| InputPortIndexInRange(int index, const char *action) | vtkAlgorithm | protected |
| InsertAtom(const char *atom, float *pos) | vtkXYZMolReader | protected |
| InternalGrabFocus(vtkCommand *mouseEvents, vtkCommand *keypressEvents=NULL) | vtkObject | protected |
| InternalReleaseFocus() | vtkObject | protected |
| InvokeEvent(unsigned long event, void *callData) | vtkObject | |
| InvokeEvent(const char *event, void *callData) | vtkObject | |
| InvokeEvent(unsigned long event) | vtkObject | inline |
| InvokeEvent(const char *event) | vtkObject | inline |
| IsA(const char *type) | vtkXYZMolReader | virtual |
| IsHetatm | vtkMoleculeReaderBase | protected |
| IsTypeOf(const char *type) | vtkXYZMolReader | static |
| MakeAtomType(const char *atype) | vtkMoleculeReaderBase | protected |
| MakeBonds(vtkPoints *, vtkIdTypeArray *, vtkCellArray *) | vtkMoleculeReaderBase | protected |
| MaxTimeStep | vtkXYZMolReader | protected |
| Modified() | vtkObject | virtual |
| ModifyRequest(vtkInformation *request, int when) | vtkAlgorithm | virtual |
| Molecule | vtkMoleculeReaderBase | protected |
| MTime | vtkObject | protected |
| New() | vtkXYZMolReader | static |
| NewInstance() const | vtkXYZMolReader | |
| NewInstanceInternal() const | vtkXYZMolReader | protectedvirtual |
| NumberOfAtoms | vtkMoleculeReaderBase | protected |
| vtkObjectBase::operator=(const vtkObjectBase &) | vtkObjectBase | inlineprotected |
| OutputPortIndexInRange(int index, const char *action) | vtkAlgorithm | protected |
| Points | vtkMoleculeReaderBase | protected |
| PORT_REQUIREMENTS_FILLED() | vtkAlgorithm | protectedstatic |
| Print(ostream &os) | vtkObjectBase | |
| PrintHeader(ostream &os, vtkIndent indent) | vtkObjectBase | virtual |
| PrintRevisions(ostream &) | vtkObjectBase | inline |
| PrintSelf(ostream &os, vtkIndent indent) | vtkXYZMolReader | virtual |
| PrintTrailer(ostream &os, vtkIndent indent) | vtkObjectBase | virtual |
| ProcessRequest(vtkInformation *, vtkInformationVector **, vtkInformationVector *) override | vtkPolyDataAlgorithm | virtual |
| vtkAlgorithm::ProcessRequest(vtkInformation *request, vtkCollection *inInfo, vtkInformationVector *outInfo) | vtkAlgorithm | |
| Progress | vtkAlgorithm | protected |
| ProgressObserver | vtkAlgorithm | protected |
| ProgressText | vtkAlgorithm | protected |
| PropagateUpdateExtent() | vtkAlgorithm | virtual |
| Radii | vtkMoleculeReaderBase | protected |
| ReadMolecule(FILE *fp, vtkPolyData *output) | vtkMoleculeReaderBase | protected |
| ReadSpecificMolecule(FILE *fp) | vtkXYZMolReader | protectedvirtual |
| ReferenceCount | vtkObjectBase | protected |
| Register(vtkObjectBase *o) override | vtkAlgorithm | virtual |
| RegisterInternal(vtkObjectBase *, vtkTypeBool check) override | vtkObject | protectedvirtual |
| ReleaseDataFlagOff() | vtkAlgorithm | |
| ReleaseDataFlagOn() | vtkAlgorithm | |
| RemoveAllInputConnections(int port) | vtkAlgorithm | virtual |
| RemoveAllInputs() | vtkAlgorithm | |
| RemoveAllObservers() | vtkObject | |
| RemoveInputConnection(int port, vtkAlgorithmOutput *input) | vtkAlgorithm | virtual |
| RemoveInputConnection(int port, int idx) | vtkAlgorithm | virtual |
| RemoveObserver(vtkCommand *) | vtkObject | |
| RemoveObserver(unsigned long tag) | vtkObject | |
| RemoveObservers(unsigned long event, vtkCommand *) | vtkObject | |
| RemoveObservers(const char *event, vtkCommand *) | vtkObject | |
| RemoveObservers(unsigned long event) | vtkObject | |
| RemoveObservers(const char *event) | vtkObject | |
| ReportReferences(vtkGarbageCollector *) override | vtkAlgorithm | protectedvirtual |
| RequestData(vtkInformation *, vtkInformationVector **, vtkInformationVector *) | vtkMoleculeReaderBase | protectedvirtual |
| RequestInformation(vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector) | vtkPolyDataAlgorithm | protectedvirtual |
| RequestUpdateExtent(vtkInformation *, vtkInformationVector **, vtkInformationVector *) | vtkPolyDataAlgorithm | protectedvirtual |
| Residue | vtkMoleculeReaderBase | protected |
| RGB | vtkMoleculeReaderBase | protected |
| SafeDownCast(vtkObjectBase *o) | vtkXYZMolReader | static |
| SecondaryStructures | vtkMoleculeReaderBase | protected |
| SecondaryStructuresBegin | vtkMoleculeReaderBase | protected |
| SecondaryStructuresEnd | vtkMoleculeReaderBase | protected |
| SetAbortExecute(int) | vtkAlgorithm | virtual |
| SetBScale(double) | vtkMoleculeReaderBase | virtual |
| SetDebug(bool debugFlag) | vtkObject | |
| SetDefaultExecutivePrototype(vtkExecutive *proto) | vtkAlgorithm | static |
| SetErrorCode(unsigned long) | vtkAlgorithm | protectedvirtual |
| SetExecutive(vtkExecutive *executive) | vtkAlgorithm | virtual |
| SetFileName(const char *) | vtkMoleculeReaderBase | virtual |
| SetGlobalWarningDisplay(int val) | vtkObject | static |
| SetHBScale(double) | vtkMoleculeReaderBase | virtual |
| SetInformation(vtkInformation *) | vtkAlgorithm | virtual |
| SetInputArrayToProcess(int idx, int port, int connection, int fieldAssociation, const char *name) | vtkAlgorithm | virtual |
| SetInputArrayToProcess(int idx, int port, int connection, int fieldAssociation, int fieldAttributeType) | vtkAlgorithm | virtual |
| SetInputArrayToProcess(int idx, vtkInformation *info) | vtkAlgorithm | virtual |
| SetInputArrayToProcess(int idx, int port, int connection, const char *fieldAssociation, const char *attributeTypeorName) | vtkAlgorithm | virtual |
| SetInputConnection(int port, vtkAlgorithmOutput *input) | vtkAlgorithm | virtual |
| SetInputConnection(vtkAlgorithmOutput *input) | vtkAlgorithm | virtual |
| SetInputData(vtkDataObject *) | vtkPolyDataAlgorithm | |
| SetInputData(int, vtkDataObject *) | vtkPolyDataAlgorithm | |
| SetInputDataInternal(int port, vtkDataObject *input) | vtkAlgorithm | inlineprotected |
| SetInputDataObject(int port, vtkDataObject *data) | vtkAlgorithm | virtual |
| SetInputDataObject(vtkDataObject *data) | vtkAlgorithm | inlinevirtual |
| SetMaxTimeStep(int) | vtkXYZMolReader | protectedvirtual |
| SetNthInputConnection(int port, int index, vtkAlgorithmOutput *input) | vtkAlgorithm | protectedvirtual |
| SetNumberOfInputConnections(int port, int n) | vtkAlgorithm | protectedvirtual |
| SetNumberOfInputPorts(int n) | vtkAlgorithm | protectedvirtual |
| SetNumberOfOutputPorts(int n) | vtkAlgorithm | protectedvirtual |
| SetOutput(vtkDataObject *d) | vtkPolyDataAlgorithm | virtual |
| SetProgress(double) | vtkAlgorithm | virtual |
| SetProgressObserver(vtkProgressObserver *) | vtkAlgorithm | |
| SetProgressText(const char *ptext) | vtkAlgorithm | |
| SetReferenceCount(int) | vtkObjectBase | |
| SetReleaseDataFlag(int) | vtkAlgorithm | virtual |
| SetTimeStep(int) | vtkXYZMolReader | virtual |
| SetUpdateExtent(int port, int piece, int numPieces, int ghostLevel) | vtkAlgorithm | |
| SetUpdateExtent(int piece, int numPieces, int ghostLevel) | vtkAlgorithm | |
| SetUpdateExtent(int port, int extent[6]) | vtkAlgorithm | |
| SetUpdateExtent(int extent[6]) | vtkAlgorithm | |
| SetUpdateExtentToWholeExtent(int port) | vtkAlgorithm | |
| SetUpdateExtentToWholeExtent() | vtkAlgorithm | |
| SINGLE_PRECISION enum value | vtkAlgorithm | |
| SubjectHelper | vtkObject | protected |
| Superclass typedef | vtkXYZMolReader | |
| TimeStep | vtkXYZMolReader | protected |
| UnRegister(vtkObjectBase *o) override | vtkAlgorithm | virtual |
| UnRegisterInternal(vtkObjectBase *, vtkTypeBool check) override | vtkObject | protectedvirtual |
| Update(int port) | vtkAlgorithm | virtual |
| Update() | vtkAlgorithm | virtual |
| Update(int port, vtkInformationVector *requests) | vtkAlgorithm | virtual |
| Update(vtkInformation *requests) | vtkAlgorithm | virtual |
| UpdateDataObject() | vtkAlgorithm | virtual |
| UpdateExtent(const int extents[6]) | vtkAlgorithm | virtual |
| UpdateExtentIsEmpty(vtkInformation *pinfo, vtkDataObject *output) | vtkAlgorithm | |
| UpdateExtentIsEmpty(vtkInformation *pinfo, int extentType) | vtkAlgorithm | |
| UpdateInformation() | vtkAlgorithm | virtual |
| UpdatePiece(int piece, int numPieces, int ghostLevels, const int extents[6]=0) | vtkAlgorithm | virtual |
| UpdateProgress(double amount) | vtkAlgorithm | |
| UpdateTimeStep(double time, int piece=-1, int numPieces=1, int ghostLevels=0, const int extents[6]=0) | vtkAlgorithm | virtual |
| UpdateWholeExtent() | vtkAlgorithm | virtual |
| vtkAlgorithm() | vtkAlgorithm | protected |
| vtkBaseTypeMacro(vtkObject, vtkObjectBase) | vtkObject | |
| vtkMoleculeReaderBase() | vtkMoleculeReaderBase | protected |
| vtkObject() | vtkObject | protected |
| vtkObjectBase() | vtkObjectBase | protected |
| vtkObjectBase(const vtkObjectBase &) | vtkObjectBase | inlineprotected |
| vtkPolyDataAlgorithm() | vtkPolyDataAlgorithm | protected |
| vtkXYZMolReader() | vtkXYZMolReader | protected |
| WeakPointers | vtkObjectBase | protected |
| ~vtkAlgorithm() override | vtkAlgorithm | protected |
| ~vtkMoleculeReaderBase() | vtkMoleculeReaderBase | protected |
| ~vtkObject() override | vtkObject | protected |
| ~vtkObjectBase() | vtkObjectBase | protectedvirtual |
| ~vtkPolyDataAlgorithm() override | vtkPolyDataAlgorithm | protected |
| ~vtkXYZMolReader() | vtkXYZMolReader | protected |
