vtkMoleculeReaderBase Class Reference

#include <vtkMoleculeReaderBase.h>

Inheritance diagram for vtkMoleculeReaderBase:

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Collaboration diagram for vtkMoleculeReaderBase:

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List of all members.

Detailed Description

read Molecular Data files

vtkMoleculeReaderBase is a source object that reads Molecule files The FileName must be specified

Thanks:: Dr. Jean M. Favre who developed and contributed this class

Definition at line 37 of file vtkMoleculeReaderBase.h.


Public Types
typedef vtkPolyDataAlgorithm	Superclass
Public Member Functions
virtual const char *	GetClassName ()
virtual int	IsA (const char *type)
void	PrintSelf (ostream &os, vtkIndent indent)
virtual void	SetFileName (const char *)
virtual char *	GetFileName ()
virtual int	GetNumberOfAtoms ()

virtual void	SetBScale (double)
virtual double	GetBScale ()

virtual void	SetHBScale (double)
virtual double	GetHBScale ()
Static Public Member Functions
static int	IsTypeOf (const char *type)
static vtkMoleculeReaderBase *	SafeDownCast (vtkObject *o)
Protected Member Functions
	vtkMoleculeReaderBase ()
	~vtkMoleculeReaderBase ()
virtual int	RequestData (vtkInformation , vtkInformationVector , vtkInformationVector )
int	ReadMolecule (FILE fp, vtkPolyData output)
int	MakeAtomType (const char *atype)
int	MakeBonds (vtkPoints , vtkIdTypeArray , vtkCellArray *)
virtual void	ReadSpecificMolecule (FILE *fp)=0
Protected Attributes
char *	FileName
double	BScale
double	HBScale
int	NumberOfAtoms
vtkPoints *	Points
vtkUnsignedCharArray *	RGB
vtkFloatArray *	Radii
vtkIdTypeArray *	AtomType

Member Typedef Documentation

typedef vtkPolyDataAlgorithm vtkMoleculeReaderBase::Superclass

Reimplemented from vtkPolyDataAlgorithm.

Reimplemented in vtkGaussianCubeReader, vtkPDBReader, and vtkXYZMolReader.

Definition at line 40 of file vtkMoleculeReaderBase.h.

Constructor & Destructor Documentation

vtkMoleculeReaderBase::vtkMoleculeReaderBase ( ) [protected]

vtkMoleculeReaderBase::~vtkMoleculeReaderBase ( ) [protected]

Member Function Documentation

virtual const char* vtkMoleculeReaderBase::GetClassName ( ) [virtual]

Reimplemented from vtkPolyDataAlgorithm.

Reimplemented in vtkGaussianCubeReader, vtkPDBReader, and vtkXYZMolReader.

static int vtkMoleculeReaderBase::IsTypeOf ( const char * name ) [static]

Return 1 if this class type is the same type of (or a subclass of) the named class. Returns 0 otherwise. This method works in combination with vtkTypeMacro found in vtkSetGet.h.

Reimplemented from vtkPolyDataAlgorithm.

Reimplemented in vtkGaussianCubeReader, vtkPDBReader, and vtkXYZMolReader.

virtual int vtkMoleculeReaderBase::IsA ( const char * name ) [virtual]

Return 1 if this class is the same type of (or a subclass of) the named class. Returns 0 otherwise. This method works in combination with vtkTypeMacro found in vtkSetGet.h.

Reimplemented from vtkPolyDataAlgorithm.

Reimplemented in vtkGaussianCubeReader, vtkPDBReader, and vtkXYZMolReader.

static vtkMoleculeReaderBase* vtkMoleculeReaderBase::SafeDownCast ( vtkObject * o ) [static]

Reimplemented from vtkPolyDataAlgorithm.

Reimplemented in vtkGaussianCubeReader, vtkPDBReader, and vtkXYZMolReader.

void vtkMoleculeReaderBase::PrintSelf	(	ostream &	os,
		vtkIndent	indent
	)			`[virtual]`

Methods invoked by print to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from vtkPolyDataAlgorithm.

Reimplemented in vtkGaussianCubeReader, vtkPDBReader, and vtkXYZMolReader.

virtual void vtkMoleculeReaderBase::SetFileName ( const char * ) [virtual]

Reimplemented in vtkGaussianCubeReader.

virtual char* vtkMoleculeReaderBase::GetFileName ( ) [virtual]

Reimplemented in vtkGaussianCubeReader.

virtual void vtkMoleculeReaderBase::SetBScale ( double ) [virtual]

A scaling factor to compute bonds between non-hydrogen atoms

virtual double vtkMoleculeReaderBase::GetBScale ( ) [virtual]

A scaling factor to compute bonds between non-hydrogen atoms

virtual void vtkMoleculeReaderBase::SetHBScale ( double ) [virtual]

A scaling factor to compute bonds with hydrogen atoms.

virtual double vtkMoleculeReaderBase::GetHBScale ( ) [virtual]

A scaling factor to compute bonds with hydrogen atoms.

virtual int vtkMoleculeReaderBase::GetNumberOfAtoms ( ) [virtual]

virtual int vtkMoleculeReaderBase::RequestData	(	vtkInformation *	request,
		vtkInformationVector **	inputVector,
		vtkInformationVector *	outputVector
	)			`[protected, virtual]`