vtkPPCAStatistics Class Reference

A class for parallel principal component analysis. More...

#include <vtkPPCAStatistics.h>

Inheritance diagram for vtkPPCAStatistics:

Collaboration diagram for vtkPPCAStatistics:

Public Types
typedef vtkPCAStatistics	Superclass
Public Types inherited from vtkPCAStatistics
enum	NormalizationType {   NONE, TRIANGLE_SPECIFIED, DIAGONAL_SPECIFIED, DIAGONAL_VARIANCE,   NUM_NORMALIZATION_SCHEMES }
	Methods by which the covariance matrix may be normalized. More...
enum	ProjectionType { FULL_BASIS, FIXED_BASIS_SIZE, FIXED_BASIS_ENERGY, NUM_BASIS_SCHEMES }
	These are the enumeration values that SetBasisScheme() accepts and GetBasisScheme returns. More...
typedef vtkMultiCorrelativeStatistics	Superclass
Public Types inherited from vtkMultiCorrelativeStatistics
typedef vtkStatisticsAlgorithm	Superclass
Public Types inherited from vtkStatisticsAlgorithm
enum	InputPorts { INPUT_DATA = 0, LEARN_PARAMETERS = 1, INPUT_MODEL = 2 }
	enumeration values to specify input port types More...
enum	OutputIndices { OUTPUT_DATA = 0, OUTPUT_MODEL = 1, OUTPUT_TEST = 2 }
	enumeration values to specify output port types More...
typedef vtkTableAlgorithm	Superclass
Public Types inherited from vtkTableAlgorithm
typedef vtkAlgorithm	Superclass
Public Types inherited from vtkAlgorithm
enum	DesiredOutputPrecision { SINGLE_PRECISION, DOUBLE_PRECISION, DEFAULT_PRECISION }
	Values used for setting the desired output precision for various algorithms. More...
typedef vtkObject	Superclass

Public Member Functions
virtual int	IsA (const char *type)
	Return 1 if this class is the same type of (or a subclass of) the named class. More...
vtkPPCAStatistics *	NewInstance () const
void	PrintSelf (ostream &os, vtkIndent indent)
	Methods invoked by print to print information about the object including superclasses. More...
virtual void	SetController (vtkMultiProcessController *)
	Get/Set the multiprocess controller. More...
virtual vtkMultiProcessController *	GetController ()
	Get/Set the multiprocess controller. More...
Public Member Functions inherited from vtkPCAStatistics
vtkPCAStatistics *	NewInstance () const
void	PrintSelf (ostream &os, vtkIndent indent) override
	Methods invoked by print to print information about the object including superclasses. More...
bool	SetParameter (const char *parameter, int index, vtkVariant value) override
	A convenience method (in particular for access from other applications) to set parameter values. More...
virtual void	SetNormalizationScheme (int)
	This determines how (or if) the covariance matrix cov is normalized before PCA. More...
virtual int	GetNormalizationScheme ()
	This determines how (or if) the covariance matrix cov is normalized before PCA. More...
virtual void	SetNormalizationSchemeByName (const char *sname)
	This determines how (or if) the covariance matrix cov is normalized before PCA. More...
virtual const char *	GetNormalizationSchemeName (int scheme)
	This determines how (or if) the covariance matrix cov is normalized before PCA. More...
virtual vtkTable *	GetSpecifiedNormalization ()
	These methods allow you to set/get values used to normalize the covariance matrix before PCA. More...
virtual void	SetSpecifiedNormalization (vtkTable *)
	These methods allow you to set/get values used to normalize the covariance matrix before PCA. More...
void	GetEigenvalues (int request, vtkDoubleArray *)
	Get the eigenvalues. More...
void	GetEigenvalues (vtkDoubleArray *)
	Get the eigenvalues. More...
double	GetEigenvalue (int request, int i)
	Get the eigenvalues. More...
double	GetEigenvalue (int i)
	Get the eigenvalues. More...
void	GetEigenvectors (int request, vtkDoubleArray *eigenvectors)
	Get the eigenvectors. More...
void	GetEigenvectors (vtkDoubleArray *eigenvectors)
	Get the eigenvectors. More...
void	GetEigenvector (int i, vtkDoubleArray *eigenvector)
	Get the eigenvectors. More...
void	GetEigenvector (int request, int i, vtkDoubleArray *eigenvector)
	Get the eigenvectors. More...
virtual void	SetBasisScheme (int)
	This variable controls the dimensionality of output tuples in Assess operation. More...
virtual int	GetBasisScheme ()
	This variable controls the dimensionality of output tuples in Assess operation. More...
virtual const char *	GetBasisSchemeName (int schemeIndex)
	This variable controls the dimensionality of output tuples in Assess operation. More...
virtual void	SetBasisSchemeByName (const char *schemeName)
	This variable controls the dimensionality of output tuples in Assess operation. More...
virtual void	SetFixedBasisSize (int)
	The number of basis vectors to use. More...
virtual int	GetFixedBasisSize ()
	The number of basis vectors to use. More...
virtual void	SetFixedBasisEnergy (double)
	The minimum energy the new basis should use, as a fraction. More...
virtual double	GetFixedBasisEnergy ()
	The minimum energy the new basis should use, as a fraction. More...
Public Member Functions inherited from vtkMultiCorrelativeStatistics
vtkMultiCorrelativeStatistics *	NewInstance () const
void	Aggregate (vtkDataObjectCollection *, vtkMultiBlockDataSet *) override
	Given a collection of models, calculate aggregate model. More...
virtual void	SetMedianAbsoluteDeviation (bool)
	If set to true, the covariance matrix is replaced by the Median Absolute Deviation matrix. More...
virtual bool	GetMedianAbsoluteDeviation ()
	If set to true, the covariance matrix is replaced by the Median Absolute Deviation matrix. More...
virtual void	MedianAbsoluteDeviationOn ()
	If set to true, the covariance matrix is replaced by the Median Absolute Deviation matrix. More...
virtual void	MedianAbsoluteDeviationOff ()
	If set to true, the covariance matrix is replaced by the Median Absolute Deviation matrix. More...
Public Member Functions inherited from vtkStatisticsAlgorithm
vtkStatisticsAlgorithm *	NewInstance () const
void	PrintSelf (ostream &os, vtkIndent indent) override
	Methods invoked by print to print information about the object including superclasses. More...
virtual void	SetLearnOptionParameterConnection (vtkAlgorithmOutput *params)
	A convenience method for setting learn input parameters (if one is expected or allowed). More...
virtual void	SetLearnOptionParameters (vtkDataObject *params)
	A convenience method for setting learn input parameters (if one is expected or allowed). More...
virtual void	SetInputModelConnection (vtkAlgorithmOutput *model)
	A convenience method for setting the input model connection (if one is expected or allowed). More...
virtual void	SetInputModel (vtkDataObject *model)
	A convenience method for setting the input model (if one is expected or allowed). More...
virtual void	SetColumnStatus (const char *namCol, int status)
	Add or remove a column from the current analysis request. More...
virtual void	ResetAllColumnStates ()
	Set the the status of each and every column in the current request to OFF (0). More...
virtual int	RequestSelectedColumns ()
	Use the current column status values to produce a new request for statistics to be produced when RequestData() is called. More...
virtual void	ResetRequests ()
	Empty the list of current requests. More...
virtual vtkIdType	GetNumberOfRequests ()
	Return the number of requests. More...
virtual vtkIdType	GetNumberOfColumnsForRequest (vtkIdType request)
	Return the number of columns for a given request. More...
virtual const char *	GetColumnForRequest (vtkIdType r, vtkIdType c)
	Provide the name of the c-th column for the r-th request. More...
virtual int	GetColumnForRequest (vtkIdType r, vtkIdType c, vtkStdString &columnName)
void	AddColumn (const char *namCol)
	Convenience method to create a request with a single column name namCol in a single call; this is the preferred method to select columns, ensuring selection consistency (a single column per request). More...
void	AddColumnPair (const char *namColX, const char *namColY)
	Convenience method to create a request with a single column name pair (namColX, namColY) in a single call; this is the preferred method to select columns pairs, ensuring selection consistency (a pair of columns per request). More...
virtual void	SetLearnOption (bool)
	Set/Get the Learn operation. More...
virtual bool	GetLearnOption ()
	Set/Get the Learn operation. More...
virtual void	SetDeriveOption (bool)
	Set/Get the Derive operation. More...
virtual bool	GetDeriveOption ()
	Set/Get the Derive operation. More...
virtual void	SetAssessOption (bool)
	Set/Get the Assess operation. More...
virtual bool	GetAssessOption ()
	Set/Get the Assess operation. More...
virtual void	SetTestOption (bool)
	Set/Get the Test operation. More...
virtual bool	GetTestOption ()
	Set/Get the Test operation. More...
virtual void	SetNumberOfPrimaryTables (vtkIdType)
	Set/Get the number of tables in the primary model. More...
virtual vtkIdType	GetNumberOfPrimaryTables ()
	Set/Get the number of tables in the primary model. More...
virtual void	SetAssessNames (vtkStringArray *)
	Set/get assessment names. More...
virtual vtkStringArray *	GetAssessNames ()
	Set/get assessment names. More...
Public Member Functions inherited from vtkTableAlgorithm
vtkTableAlgorithm *	NewInstance () const
int	ProcessRequest (vtkInformation *, vtkInformationVector **, vtkInformationVector *) override
	see vtkAlgorithm for details More...
vtkTable *	GetOutput ()
	Get the output data object for a port on this algorithm. More...
vtkTable *	GetOutput (int index)
void	SetInputData (vtkDataObject *obj)
	Assign a data object as input. More...
void	SetInputData (int index, vtkDataObject *obj)
Public Member Functions inherited from vtkAlgorithm
vtkAlgorithm *	NewInstance () const
int	HasExecutive ()
	Check whether this algorithm has an assigned executive. More...
vtkExecutive *	GetExecutive ()
	Get this algorithm's executive. More...
virtual void	SetExecutive (vtkExecutive *executive)
	Set this algorithm's executive. More...
int	ProcessRequest (vtkInformation *request, vtkCollection *inInfo, vtkInformationVector *outInfo)
	Version of ProcessRequest() that is wrapped. More...
virtual int	ComputePipelineMTime (vtkInformation *request, vtkInformationVector **inInfoVec, vtkInformationVector *outInfoVec, int requestFromOutputPort, vtkMTimeType *mtime)
	A special version of ProcessRequest meant specifically for the pipeline modified time request. More...
virtual int	ModifyRequest (vtkInformation *request, int when)
	This method gives the algorithm a chance to modify the contents of a request before or after (specified in the when argument) it is forwarded. More...
vtkInformation *	GetInputPortInformation (int port)
	Get the information object associated with an input port. More...
vtkInformation *	GetOutputPortInformation (int port)
	Get the information object associated with an output port. More...
int	GetNumberOfInputPorts ()
	Get the number of input ports used by the algorithm. More...
int	GetNumberOfOutputPorts ()
	Get the number of output ports provided by the algorithm. More...
void	UpdateProgress (double amount)
	Update the progress of the process object. More...
virtual void	SetInputArrayToProcess (int idx, int port, int connection, const char *fieldAssociation, const char *attributeTypeorName)
	String based versions of SetInputArrayToProcess(). More...
vtkInformation *	GetInputArrayInformation (int idx)
	Get the info object for the specified input array to this algorithm. More...
void	RemoveAllInputs ()
	Remove all the input data. More...
vtkDataObject *	GetOutputDataObject (int port)
	Get the data object that will contain the algorithm output for the given port. More...
vtkDataObject *	GetInputDataObject (int port, int connection)
	Get the data object that will contain the algorithm input for the given port and given connection. More...
virtual void	RemoveInputConnection (int port, vtkAlgorithmOutput *input)
	Remove a connection from the given input port index. More...
virtual void	RemoveInputConnection (int port, int idx)
	Remove a connection given by index idx. More...
virtual void	RemoveAllInputConnections (int port)
	Removes all input connections. More...
virtual void	SetInputDataObject (int port, vtkDataObject *data)
	Sets the data-object as an input on the given port index. More...
virtual void	SetInputDataObject (vtkDataObject *data)
virtual void	AddInputDataObject (int port, vtkDataObject *data)
	Add the data-object as an input to this given port. More...
virtual void	AddInputDataObject (vtkDataObject *data)
vtkAlgorithmOutput *	GetOutputPort (int index)
	Get a proxy object corresponding to the given output port of this algorithm. More...
vtkAlgorithmOutput *	GetOutputPort ()
int	GetNumberOfInputConnections (int port)
	Get the number of inputs currently connected to a port. More...
int	GetTotalNumberOfInputConnections ()
	Get the total number of inputs for this algorithm. More...
vtkAlgorithmOutput *	GetInputConnection (int port, int index)
	Get the algorithm output port connected to an input port. More...
vtkAlgorithm *	GetInputAlgorithm (int port, int index, int &algPort)
	Returns the algorithm and the output port index of that algorithm connected to a port-index pair. More...
vtkAlgorithm *	GetInputAlgorithm (int port, int index)
	Returns the algorithm connected to a port-index pair. More...
vtkAlgorithm *	GetInputAlgorithm ()
	Equivalent to GetInputAlgorithm(0, 0). More...
vtkExecutive *	GetInputExecutive (int port, int index)
	Returns the executive associated with a particular input connection. More...
vtkExecutive *	GetInputExecutive ()
	Equivalent to GetInputExecutive(0, 0) More...
vtkInformation *	GetInputInformation (int port, int index)
	Return the information object that is associated with a particular input connection. More...
vtkInformation *	GetInputInformation ()
	Equivalent to GetInputInformation(0, 0) More...
vtkInformation *	GetOutputInformation (int port)
	Return the information object that is associated with a particular output port. More...
virtual int	Update (int port, vtkInformationVector *requests)
	This method enables the passing of data requests to the algorithm to be used during execution (in addition to bringing a particular port up-to-date). More...
virtual int	Update (vtkInformation *requests)
	Convenience method to update an algorithm after passing requests to its first output port. More...
virtual int	UpdatePiece (int piece, int numPieces, int ghostLevels, const int extents[6]=0)
	Convenience method to update an algorithm after passing requests to its first output port. More...
virtual int	UpdateExtent (const int extents[6])
	Convenience method to update an algorithm after passing requests to its first output port. More...
virtual int	UpdateTimeStep (double time, int piece=-1, int numPieces=1, int ghostLevels=0, const int extents[6]=0)
	Convenience method to update an algorithm after passing requests to its first output port. More...
virtual void	UpdateInformation ()
	Bring the algorithm's information up-to-date. More...
virtual void	UpdateDataObject ()
	Create output object(s). More...
virtual void	PropagateUpdateExtent ()
	Propagate meta-data upstream. More...
virtual void	UpdateWholeExtent ()
	Bring this algorithm's outputs up-to-date. More...
void	ConvertTotalInputToPortConnection (int ind, int &port, int &conn)
	Convenience routine to convert from a linear ordering of input connections to a port/connection pair. More...
int	SetUpdateExtentToWholeExtent (int port)
	If the whole output extent is required, this method can be called to set the output update extent to the whole extent. More...
int	SetUpdateExtentToWholeExtent ()
	Convenience function equivalent to SetUpdateExtentToWholeExtent(0) This method assumes that the whole extent is known (that UpdateInformation has been called). More...
void	SetUpdateExtent (int port, int piece, int numPieces, int ghostLevel)
	Set the output update extent in terms of piece and ghost levels. More...
void	SetUpdateExtent (int piece, int numPieces, int ghostLevel)
	Convenience function equivalent to SetUpdateExtent(0, piece, numPieces, ghostLevel) More...
void	SetUpdateExtent (int port, int extent[6])
	Set the output update extent for data objects that use 3D extents. More...
void	SetUpdateExtent (int extent[6])
	Convenience function equivalent to SetUpdateExtent(0, extent) More...
virtual vtkInformation *	GetInformation ()
	Set/Get the information object associated with this algorithm. More...
virtual void	SetInformation (vtkInformation *)
	Set/Get the information object associated with this algorithm. More...
void	Register (vtkObjectBase *o) override
	Participate in garbage collection. More...
void	UnRegister (vtkObjectBase *o) override
	Participate in garbage collection. More...
virtual void	SetAbortExecute (int)
	Set/Get the AbortExecute flag for the process object. More...
virtual int	GetAbortExecute ()
	Set/Get the AbortExecute flag for the process object. More...
virtual void	AbortExecuteOn ()
	Set/Get the AbortExecute flag for the process object. More...
virtual void	AbortExecuteOff ()
	Set/Get the AbortExecute flag for the process object. More...
virtual void	SetProgress (double)
	Set/Get the execution progress of a process object. More...
virtual double	GetProgress ()
	Set/Get the execution progress of a process object. More...
void	SetProgressText (const char *ptext)
	Set the current text message associated with the progress state. More...
virtual char *	GetProgressText ()
	Set the current text message associated with the progress state. More...
virtual unsigned long	GetErrorCode ()
	The error code contains a possible error that occurred while reading or writing the file. More...
virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, const char *name)
	Set the input data arrays that this algorithm will process. More...
virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, int fieldAttributeType)
	Set the input data arrays that this algorithm will process. More...
virtual void	SetInputArrayToProcess (int idx, vtkInformation *info)
	Set the input data arrays that this algorithm will process. More...
virtual void	SetInputConnection (int port, vtkAlgorithmOutput *input)
	Set the connection for the given input port index. More...
virtual void	SetInputConnection (vtkAlgorithmOutput *input)
	Set the connection for the given input port index. More...
virtual void	AddInputConnection (int port, vtkAlgorithmOutput *input)
	Add a connection to the given input port index. More...
virtual void	AddInputConnection (vtkAlgorithmOutput *input)
	Add a connection to the given input port index. More...
virtual void	Update (int port)
	Bring this algorithm's outputs up-to-date. More...
virtual void	Update ()
	Bring this algorithm's outputs up-to-date. More...
virtual void	SetReleaseDataFlag (int)
	Turn release data flag on or off for all output ports. More...
virtual int	GetReleaseDataFlag ()
	Turn release data flag on or off for all output ports. More...
void	ReleaseDataFlagOn ()
	Turn release data flag on or off for all output ports. More...
void	ReleaseDataFlagOff ()
	Turn release data flag on or off for all output ports. More...
int	UpdateExtentIsEmpty (vtkInformation *pinfo, vtkDataObject *output)
	This detects when the UpdateExtent will generate no data This condition is satisfied when the UpdateExtent has zero volume (0,-1,...) or the UpdateNumberOfPieces is 0. More...
int	UpdateExtentIsEmpty (vtkInformation *pinfo, int extentType)
	This detects when the UpdateExtent will generate no data This condition is satisfied when the UpdateExtent has zero volume (0,-1,...) or the UpdateNumberOfPieces is 0. More...
int *	GetUpdateExtent ()
	These functions return the update extent for output ports that use 3D extents. More...
int *	GetUpdateExtent (int port)
	These functions return the update extent for output ports that use 3D extents. More...
void	GetUpdateExtent (int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
	These functions return the update extent for output ports that use 3D extents. More...
void	GetUpdateExtent (int port, int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
	These functions return the update extent for output ports that use 3D extents. More...
void	GetUpdateExtent (int extent[6])
	These functions return the update extent for output ports that use 3D extents. More...
void	GetUpdateExtent (int port, int extent[6])
	These functions return the update extent for output ports that use 3D extents. More...
int	GetUpdatePiece ()
	These functions return the update extent for output ports that use piece extents. More...
int	GetUpdatePiece (int port)
	These functions return the update extent for output ports that use piece extents. More...
int	GetUpdateNumberOfPieces ()
	These functions return the update extent for output ports that use piece extents. More...
int	GetUpdateNumberOfPieces (int port)
	These functions return the update extent for output ports that use piece extents. More...
int	GetUpdateGhostLevel ()
	These functions return the update extent for output ports that use piece extents. More...
int	GetUpdateGhostLevel (int port)
	These functions return the update extent for output ports that use piece extents. More...
void	SetProgressObserver (vtkProgressObserver *)
	If an ProgressObserver is set, the algorithm will report progress through it rather than directly. More...
virtual vtkProgressObserver *	GetProgressObserver ()
	If an ProgressObserver is set, the algorithm will report progress through it rather than directly. More...
Public Member Functions inherited from vtkObject
	vtkBaseTypeMacro (vtkObject, vtkObjectBase)
virtual void	DebugOn ()
	Turn debugging output on. More...
virtual void	DebugOff ()
	Turn debugging output off. More...
bool	GetDebug ()
	Get the value of the debug flag. More...
void	SetDebug (bool debugFlag)
	Set the value of the debug flag. More...
virtual void	Modified ()
	Update the modification time for this object. More...
virtual vtkMTimeType	GetMTime ()
	Return this object's modified time. More...
void	RemoveObserver (unsigned long tag)
void	RemoveObservers (unsigned long event)
void	RemoveObservers (const char *event)
void	RemoveAllObservers ()
int	HasObserver (unsigned long event)
int	HasObserver (const char *event)
int	InvokeEvent (unsigned long event)
int	InvokeEvent (const char *event)
unsigned long	AddObserver (unsigned long event, vtkCommand *, float priority=0.0f)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
unsigned long	AddObserver (const char *event, vtkCommand *, float priority=0.0f)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
vtkCommand *	GetCommand (unsigned long tag)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
void	RemoveObserver (vtkCommand *)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
void	RemoveObservers (unsigned long event, vtkCommand *)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
void	RemoveObservers (const char *event, vtkCommand *)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
int	HasObserver (unsigned long event, vtkCommand *)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
int	HasObserver (const char *event, vtkCommand *)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object. More...
template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, void(T::*callback)(), float priority=0.0f)
	Overloads to AddObserver that allow developers to add class member functions as callbacks for events. More...
template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, void(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
	Overloads to AddObserver that allow developers to add class member functions as callbacks for events. More...
template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, bool(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
	Allow user to set the AbortFlagOn() with the return value of the callback method. More...
int	InvokeEvent (unsigned long event, void *callData)
	This method invokes an event and return whether the event was aborted or not. More...
int	InvokeEvent (const char *event, void *callData)
	This method invokes an event and return whether the event was aborted or not. More...
Public Member Functions inherited from vtkObjectBase
const char *	GetClassName () const
	Return the class name as a string. More...
virtual void	Delete ()
	Delete a VTK object. More...
virtual void	FastDelete ()
	Delete a reference to this object. More...
void	InitializeObjectBase ()
void	Print (ostream &os)
	Print an object to an ostream. More...
int	GetReferenceCount ()
	Return the current reference count of this object. More...
void	SetReferenceCount (int)
	Sets the reference count. More...
void	PrintRevisions (ostream &)
	Legacy. More...
virtual void	PrintHeader (ostream &os, vtkIndent indent)
	Methods invoked by print to print information about the object including superclasses. More...
virtual void	PrintTrailer (ostream &os, vtkIndent indent)
	Methods invoked by print to print information about the object including superclasses. More...

Static Public Member Functions
static int	IsTypeOf (const char *type)
static vtkPPCAStatistics *	SafeDownCast (vtkObjectBase *o)
static vtkPPCAStatistics *	New ()
Static Public Member Functions inherited from vtkPCAStatistics
static int	IsTypeOf (const char *type)
static vtkPCAStatistics *	SafeDownCast (vtkObjectBase *o)
static vtkPCAStatistics *	New ()
Static Public Member Functions inherited from vtkMultiCorrelativeStatistics
static int	IsTypeOf (const char *type)
static vtkMultiCorrelativeStatistics *	SafeDownCast (vtkObjectBase *o)
static vtkMultiCorrelativeStatistics *	New ()
Static Public Member Functions inherited from vtkStatisticsAlgorithm
static int	IsTypeOf (const char *type)
static vtkStatisticsAlgorithm *	SafeDownCast (vtkObjectBase *o)
Static Public Member Functions inherited from vtkTableAlgorithm
static vtkTableAlgorithm *	New ()
static int	IsTypeOf (const char *type)
static vtkTableAlgorithm *	SafeDownCast (vtkObjectBase *o)
Static Public Member Functions inherited from vtkAlgorithm
static vtkAlgorithm *	New ()
static int	IsTypeOf (const char *type)
static vtkAlgorithm *	SafeDownCast (vtkObjectBase *o)
static vtkInformationIntegerKey *	INPUT_IS_OPTIONAL ()
	Keys used to specify input port requirements. More...
static vtkInformationIntegerKey *	INPUT_IS_REPEATABLE ()
static vtkInformationInformationVectorKey *	INPUT_REQUIRED_FIELDS ()
static vtkInformationStringVectorKey *	INPUT_REQUIRED_DATA_TYPE ()
static vtkInformationInformationVectorKey *	INPUT_ARRAYS_TO_PROCESS ()
static vtkInformationIntegerKey *	INPUT_PORT ()
static vtkInformationIntegerKey *	INPUT_CONNECTION ()
static vtkInformationIntegerKey *	CAN_PRODUCE_SUB_EXTENT ()
	This key tells the executive that a particular output port is capable of producing an arbitrary subextent of the whole extent. More...
static vtkInformationIntegerKey *	CAN_HANDLE_PIECE_REQUEST ()
	Key that tells the pipeline that a particular algorithm can or cannot handle piece request. More...
static void	SetDefaultExecutivePrototype (vtkExecutive *proto)
	If the DefaultExecutivePrototype is set, a copy of it is created in CreateDefaultExecutive() using NewInstance(). More...
Static Public Member Functions inherited from vtkObject
static vtkObject *	New ()
	Create an object with Debug turned off, modified time initialized to zero, and reference counting on. More...
static void	BreakOnError ()
	This method is called when vtkErrorMacro executes. More...
static void	SetGlobalWarningDisplay (int val)
	This is a global flag that controls whether any debug, warning or error messages are displayed. More...
static void	GlobalWarningDisplayOn ()
	This is a global flag that controls whether any debug, warning or error messages are displayed. More...
static void	GlobalWarningDisplayOff ()
	This is a global flag that controls whether any debug, warning or error messages are displayed. More...
static int	GetGlobalWarningDisplay ()
	This is a global flag that controls whether any debug, warning or error messages are displayed. More...
Static Public Member Functions inherited from vtkObjectBase
static vtkTypeBool	IsTypeOf (const char *name)
	Return 1 if this class type is the same type of (or a subclass of) the named class. More...
static vtkObjectBase *	New ()
	Create an object with Debug turned off, modified time initialized to zero, and reference counting on. More...

Protected Member Functions
virtual vtkObjectBase *	NewInstanceInternal () const
	vtkPPCAStatistics ()
	~vtkPPCAStatistics ()
virtual void	Learn (vtkTable *inData, vtkTable *inParameters, vtkMultiBlockDataSet *outMeta)
	Execute the calculations required by the Learn option, given some input Data. More...
virtual void	Test (vtkTable *, vtkMultiBlockDataSet *, vtkTable *)
	Execute the calculations required by the Test option. More...
virtual vtkOrderStatistics *	CreateOrderStatisticsInstance ()
	Return a new vtkOrderStatistics instance. More...
Protected Member Functions inherited from vtkPCAStatistics
	vtkPCAStatistics ()
	~vtkPCAStatistics () override
int	FillInputPortInformation (int port, vtkInformation *info) override
	This algorithm accepts a vtkTable containing normalization values for its fourth input (port 3). More...
void	Derive (vtkMultiBlockDataSet *) override
	Execute the calculations required by the Derive option. More...
void	Test (vtkTable *, vtkMultiBlockDataSet *, vtkTable *) override
	Execute the calculations required by the Test option. More...
void	Assess (vtkTable *, vtkMultiBlockDataSet *, vtkTable *) override
	Execute the calculations required by the Assess option. More...
virtual vtkDoubleArray *	CalculatePValues (vtkIdTypeArray *, vtkDoubleArray *)
	Calculate p-value. More...
void	SelectAssessFunctor (vtkTable *inData, vtkDataObject *inMeta, vtkStringArray *rowNames, AssessFunctor *&dfunc) override
	Provide the appropriate assessment functor. More...
Protected Member Functions inherited from vtkMultiCorrelativeStatistics
	vtkMultiCorrelativeStatistics ()
	~vtkMultiCorrelativeStatistics () override
void	Learn (vtkTable *, vtkTable *, vtkMultiBlockDataSet *) override
	Execute the calculations required by the Learn option. More...
virtual void	ComputeMedian (vtkTable *inData, vtkTable *outData)
	Computes the median of inData with vtkOrderStatistics. More...
Protected Member Functions inherited from vtkStatisticsAlgorithm
	vtkStatisticsAlgorithm ()
	~vtkStatisticsAlgorithm () override
int	FillInputPortInformation (int port, vtkInformation *info) override
	Fill the input port information objects for this algorithm. More...
int	FillOutputPortInformation (int port, vtkInformation *info) override
	Fill the output port information objects for this algorithm. More...
int	RequestData (vtkInformation *, vtkInformationVector **, vtkInformationVector *) override
	This is called by the superclass. More...
void	Assess (vtkTable *, vtkMultiBlockDataSet *, vtkTable *, int)
	A convenience implementation for generic assessment with variable number of variables. More...
Protected Member Functions inherited from vtkTableAlgorithm
	vtkTableAlgorithm ()
	~vtkTableAlgorithm () override
virtual int	RequestInformation (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector)
virtual int	RequestUpdateExtent (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
	This is called by the superclass. More...
Protected Member Functions inherited from vtkAlgorithm
	vtkAlgorithm ()
	~vtkAlgorithm () override
virtual void	SetNumberOfInputPorts (int n)
	Set the number of input ports used by the algorithm. More...
virtual void	SetNumberOfOutputPorts (int n)
	Set the number of output ports provided by the algorithm. More...
int	InputPortIndexInRange (int index, const char *action)
int	OutputPortIndexInRange (int index, const char *action)
int	GetInputArrayAssociation (int idx, vtkInformationVector **inputVector)
	Get the assocition of the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass. More...
vtkInformation *	GetInputArrayFieldInformation (int idx, vtkInformationVector **inputVector)
	This method takes in an index (as specified in SetInputArrayToProcess) and a pipeline information vector. More...
virtual vtkExecutive *	CreateDefaultExecutive ()
	Create a default executive. More...
void	ReportReferences (vtkGarbageCollector *) override
virtual void	SetNthInputConnection (int port, int index, vtkAlgorithmOutput *input)
	Replace the Nth connection on the given input port. More...
virtual void	SetNumberOfInputConnections (int port, int n)
	Set the number of input connections on the given input port. More...
void	SetInputDataInternal (int port, vtkDataObject *input)
	These methods are used by subclasses to implement methods to set data objects directly as input. More...
void	AddInputDataInternal (int port, vtkDataObject *input)
int	GetInputArrayAssociation (int idx, int connection, vtkInformationVector **inputVector)
	Filters that have multiple connections on one port can use this signature. More...
int	GetInputArrayAssociation (int idx, vtkDataObject *input)
	Filters that have multiple connections on one port can use this signature. More...
vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector)
	Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass. More...
vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
	Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass. More...
vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
	Filters that have multiple connections on one port can use this signature. More...
vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
	Filters that have multiple connections on one port can use this signature. More...
vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input)
	Filters that have multiple connections on one port can use this signature. More...
vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input, int &association)
	Filters that have multiple connections on one port can use this signature. More...
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector)
	Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass. More...
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
	Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass. More...
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
	Filters that have multiple connections on one port can use this signature. More...
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
	Filters that have multiple connections on one port can use this signature. More...
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input)
	Filters that have multiple connections on one port can use this signature. More...
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input, int &association)
	Filters that have multiple connections on one port can use this signature. More...
virtual void	SetErrorCode (unsigned long)
	The error code contains a possible error that occurred while reading or writing the file. More...
Protected Member Functions inherited from vtkObject
	vtkObject ()
	~vtkObject () override
void	RegisterInternal (vtkObjectBase *, vtkTypeBool check) override
void	UnRegisterInternal (vtkObjectBase *, vtkTypeBool check) override
void	InternalGrabFocus (vtkCommand *mouseEvents, vtkCommand *keypressEvents=NULL)
	These methods allow a command to exclusively grab all events. More...
void	InternalReleaseFocus ()
	These methods allow a command to exclusively grab all events. More...
Protected Member Functions inherited from vtkObjectBase
	vtkObjectBase ()
virtual	~vtkObjectBase ()
virtual void	CollectRevisions (ostream &)
	vtkObjectBase (const vtkObjectBase &)
void	operator= (const vtkObjectBase &)

Protected Attributes
vtkMultiProcessController *	Controller
Protected Attributes inherited from vtkPCAStatistics
int	NormalizationScheme
int	BasisScheme
int	FixedBasisSize
double	FixedBasisEnergy
Protected Attributes inherited from vtkMultiCorrelativeStatistics
bool	MedianAbsoluteDeviation
Protected Attributes inherited from vtkStatisticsAlgorithm
vtkIdType	NumberOfPrimaryTables
bool	LearnOption
bool	DeriveOption
bool	AssessOption
bool	TestOption
vtkStringArray *	AssessNames
vtkStatisticsAlgorithmPrivate *	Internals
Protected Attributes inherited from vtkAlgorithm
vtkInformation *	Information
double	Progress
char *	ProgressText
vtkProgressObserver *	ProgressObserver
unsigned long	ErrorCode
	The error code contains a possible error that occurred while reading or writing the file. More...
Protected Attributes inherited from vtkObject
bool	Debug
vtkTimeStamp	MTime
vtkSubjectHelper *	SubjectHelper
Protected Attributes inherited from vtkObjectBase
vtkAtomicInt32	ReferenceCount
vtkWeakPointerBase **	WeakPointers

Additional Inherited Members
Public Attributes inherited from vtkAlgorithm
int	AbortExecute
Static Protected Member Functions inherited from vtkAlgorithm
static vtkInformationIntegerKey *	PORT_REQUIREMENTS_FILLED ()
Static Protected Attributes inherited from vtkPCAStatistics
static const char *	BasisSchemeEnumNames [NUM_BASIS_SCHEMES+1]
static const char *	NormalizationSchemeEnumNames [NUM_NORMALIZATION_SCHEMES+1]
Static Protected Attributes inherited from vtkAlgorithm
static vtkExecutive *	DefaultExecutivePrototype

Detailed Description

A class for parallel principal component analysis.

vtkPPCAStatistics is vtkPCAStatistics subclass for parallel datasets. It learns and derives the global statistical model on each node, but assesses each individual data points on the node that owns it.

Thanks:

Thanks to Philippe Pebay, David Thompson and Janine Bennett from Sandia National Laboratories for implementing this class.

Tests:

vtkPPCAStatistics (Tests)

Definition at line 44 of file vtkPPCAStatistics.h.

Member Typedef Documentation

typedef vtkPCAStatistics vtkPPCAStatistics::Superclass

Definition at line 47 of file vtkPPCAStatistics.h.

Constructor & Destructor Documentation

vtkPPCAStatistics::vtkPPCAStatistics ( )

protected

vtkPPCAStatistics::~vtkPPCAStatistics ( )

protected

Member Function Documentation

static int vtkPPCAStatistics::IsTypeOf ( const char *  type )

static

virtual int vtkPPCAStatistics::IsA ( const char *  name )

virtual

Return 1 if this class is the same type of (or a subclass of) the named class.

Returns 0 otherwise. This method works in combination with vtkTypeMacro found in vtkSetGet.h.

Reimplemented from vtkPCAStatistics.

static vtkPPCAStatistics* vtkPPCAStatistics::SafeDownCast ( vtkObjectBase *  o )

static

virtual vtkObjectBase* vtkPPCAStatistics::NewInstanceInternal ( ) const

protectedvirtual

Reimplemented from vtkPCAStatistics.

vtkPPCAStatistics* vtkPPCAStatistics::NewInstance

(

)

const

void vtkPPCAStatistics::PrintSelf ( ostream &  os, vtkIndent  indent  )

virtual

Methods invoked by print to print information about the object including superclasses.

Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from vtkTableAlgorithm.

static vtkPPCAStatistics* vtkPPCAStatistics::New ( )

static

virtual void vtkPPCAStatistics::SetController ( vtkMultiProcessController *  )

virtual

Get/Set the multiprocess controller.

If no controller is set, single process is assumed.

virtual vtkMultiProcessController* vtkPPCAStatistics::GetController ( )

virtual

Get/Set the multiprocess controller.

If no controller is set, single process is assumed.

virtual void vtkPPCAStatistics::Learn ( vtkTable *  , vtkTable *  , vtkMultiBlockDataSet *    )

protectedvirtual

Execute the calculations required by the Learn option, given some input Data.

Implements vtkStatisticsAlgorithm.

virtual void vtkPPCAStatistics::Test ( vtkTable *  , vtkMultiBlockDataSet *  , vtkTable *    )

protectedvirtual

Execute the calculations required by the Test option.

NB: Not implemented for more than 1 processor

Implements vtkStatisticsAlgorithm.

virtual vtkOrderStatistics* vtkPPCAStatistics::CreateOrderStatisticsInstance ( )

protectedvirtual

Return a new vtkOrderStatistics instance.

Used by derived class to return a derivate class instead.

Reimplemented from vtkMultiCorrelativeStatistics.

Member Data Documentation

vtkMultiProcessController* vtkPPCAStatistics::Controller

protected

Definition at line 65 of file vtkPPCAStatistics.h.

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The documentation for this class was generated from the following file:

• /home/demarle/Builds/VTK/release/Utilities/Doxygen/dox/Filters/ParallelStatistics/vtkPPCAStatistics.h