VTK  9.3.20231207
vtkSimpleBondPerceiver.h
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1 // SPDX-FileCopyrightText: Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
2 // SPDX-License-Identifier: BSD-3-Clause
25 #ifndef vtkSimpleBondPerceiver_h
26 #define vtkSimpleBondPerceiver_h
27 
28 #include "vtkDomainsChemistryModule.h" // For export macro
29 #include "vtkMoleculeAlgorithm.h"
30 
31 VTK_ABI_NAMESPACE_BEGIN
32 class vtkDataSet;
33 class vtkMolecule;
34 class vtkPeriodicTable;
35 
36 class VTKDOMAINSCHEMISTRY_EXPORT vtkSimpleBondPerceiver : public vtkMoleculeAlgorithm
37 {
38 public:
41  void PrintSelf(ostream& os, vtkIndent indent) override;
42 
44 
47  vtkSetMacro(Tolerance, float);
48  vtkGetMacro(Tolerance, float);
50 
52 
56  vtkGetMacro(IsToleranceAbsolute, bool);
57  vtkSetMacro(IsToleranceAbsolute, bool);
59 
60 protected:
63 
64  int RequestData(vtkInformation* request, vtkInformationVector** inputVector,
65  vtkInformationVector* outputVector) override;
66 
70  virtual void ComputeBonds(vtkMolecule* molecule);
71 
78 
79  float Tolerance;
81 
82 private:
84  void operator=(const vtkSimpleBondPerceiver&) = delete;
85 };
86 
87 VTK_ABI_NAMESPACE_END
88 #endif
abstract class to specify dataset behavior
Definition: vtkDataSet.h:165
a simple class to control print indentation
Definition: vtkIndent.h:108
Store zero or more vtkInformation instances.
Store vtkAlgorithm input/output information.
Superclass for algorithms that operate on vtkMolecules.
class describing a molecule
Definition: vtkMolecule.h:84
Access to information about the elements.
Create a simple guess of a molecule's topology.
int RequestData(vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector) override
This is called by the superclass.
static vtkSimpleBondPerceiver * New()
double GetCovalentRadiusWithTolerance(vtkPeriodicTable *table, vtkIdType atomicNumber)
Get the covalent radius corresponding to atomic number, modulated by Tolerance.
void PrintSelf(ostream &os, vtkIndent indent) override
Methods invoked by print to print information about the object including superclasses.
virtual void ComputeBonds(vtkMolecule *molecule)
Compute the bonds of input molecule.
~vtkSimpleBondPerceiver() override
int vtkIdType
Definition: vtkType.h:315