vtkBiomTableReader Class Reference

read vtkTable from a .biom input file More...

#include <vtkBiomTableReader.h>

Inheritance diagram for vtkBiomTableReader:

Collaboration diagram for vtkBiomTableReader:

List of all members.

Public Types
typedef vtkTableReader	Superclass
Public Member Functions
virtual int	IsA (const char *type)
vtkBiomTableReader *	NewInstance () const
void	PrintSelf (ostream &os, vtkIndent indent)
vtkTable *	GetOutput ()
vtkTable *	GetOutput (int idx)
void	SetOutput (vtkTable *output)
Static Public Member Functions
static vtkBiomTableReader *	New ()
static int	IsTypeOf (const char *type)
static vtkBiomTableReader *	SafeDownCast (vtkObjectBase *o)
Protected Member Functions
virtual vtkObjectBase *	NewInstanceInternal () const
	vtkBiomTableReader ()
	~vtkBiomTableReader ()
virtual int	RequestData (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
virtual int	RequestUpdateExtent (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
virtual int	FillOutputPortInformation (int, vtkInformation *)
void	ParseShape ()
void	ParseDataType ()
void	ParseSparseness ()
void	InitializeData ()
void	FillData (vtkVariant v)
void	ParseSparseData ()
void	ParseDenseData ()
void	InsertValue (int row, int col, std::string value)
void	ParseId ()
void	ParseColumns ()
void	ParseRows ()

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Detailed Description

read vtkTable from a .biom input file

vtkBiomTableReader is a source object that reads ASCII biom data files. The output of this reader is a single vtkTable data object.

See also:

vtkTable vtkTableReader vtkDataReader

Tests:

vtkBiomTableReader (Tests)

Definition at line 36 of file vtkBiomTableReader.h.

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Member Typedef Documentation

typedef vtkTableReader vtkBiomTableReader::Superclass

Reimplemented from vtkTableReader.

Definition at line 40 of file vtkBiomTableReader.h.

---

Constructor & Destructor Documentation

vtkBiomTableReader::vtkBiomTableReader

(

)

[protected]

vtkBiomTableReader::~vtkBiomTableReader

(

)

[protected]

---

Member Function Documentation

static vtkBiomTableReader* vtkBiomTableReader::New

(

)

[static]

Create an object with Debug turned off, modified time initialized to zero, and reference counting on.

Reimplemented from vtkTableReader.

static int vtkBiomTableReader::IsTypeOf

(

const char *

name

)

[static]

Return 1 if this class type is the same type of (or a subclass of) the named class. Returns 0 otherwise. This method works in combination with vtkTypeMacro found in vtkSetGet.h.

Reimplemented from vtkTableReader.

virtual int vtkBiomTableReader::IsA

(

const char *

name

)

[virtual]

Return 1 if this class is the same type of (or a subclass of) the named class. Returns 0 otherwise. This method works in combination with vtkTypeMacro found in vtkSetGet.h.

Reimplemented from vtkTableReader.

static vtkBiomTableReader* vtkBiomTableReader::SafeDownCast

(

vtkObjectBase *

o

)

[static]

Reimplemented from vtkTableReader.

virtual vtkObjectBase* vtkBiomTableReader::NewInstanceInternal

(

)

const [protected, virtual]

Reimplemented from vtkTableReader.

vtkBiomTableReader* vtkBiomTableReader::NewInstance

(

)

const

Reimplemented from vtkTableReader.

void vtkBiomTableReader::PrintSelf	(	ostream &	os,
		vtkIndent	indent
	)		[virtual]

Methods invoked by print to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from vtkTableReader.

vtkTable* vtkBiomTableReader::GetOutput

(

)

Get the output of this reader.

Reimplemented from vtkTableReader.

vtkTable* vtkBiomTableReader::GetOutput

(

int

idx

)

Get the output of this reader.

Reimplemented from vtkTableReader.

void vtkBiomTableReader::SetOutput

(

vtkTable *

output

)

Get the output of this reader.

Reimplemented from vtkTableReader.

virtual int vtkBiomTableReader::RequestData	(	vtkInformation *	,
		vtkInformationVector **	,
		vtkInformationVector *
	)		[protected, virtual]

Reimplemented from vtkTableReader.

virtual int vtkBiomTableReader::RequestUpdateExtent	(	vtkInformation *	,
		vtkInformationVector **	,
		vtkInformationVector *
	)		[protected, virtual]

Reimplemented from vtkTableReader.

virtual int vtkBiomTableReader::FillOutputPortInformation	(	int	port,
		vtkInformation *	info
	)		[protected, virtual]

Fill the output port information objects for this algorithm. This is invoked by the first call to GetOutputPortInformation for each port so subclasses can specify what they can handle.

Reimplemented from vtkTableReader.

void vtkBiomTableReader::ParseShape

(

)

[protected]

void vtkBiomTableReader::ParseDataType

(

)

[protected]

void vtkBiomTableReader::ParseSparseness

(

)

[protected]

void vtkBiomTableReader::InitializeData

(

)

[protected]

void vtkBiomTableReader::FillData

(

vtkVariant

v

)

[protected]

void vtkBiomTableReader::ParseSparseData

(

)

[protected]

void vtkBiomTableReader::ParseDenseData

(

)

[protected]

void vtkBiomTableReader::InsertValue	(	int	row,
		int	col,
		std::string	value
	)		[protected]

void vtkBiomTableReader::ParseId

(

)

[protected]

void vtkBiomTableReader::ParseColumns

(

)

[protected]

void vtkBiomTableReader::ParseRows

(

)

[protected]

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The documentation for this class was generated from the following file:

• dox/IO/Infovis/vtkBiomTableReader.h