edge preserving smoothing. More...

#include <vtkImageAnisotropicDiffusion3D.h>

Inheritance diagram for vtkImageAnisotropicDiffusion3D:

Collaboration diagram for vtkImageAnisotropicDiffusion3D:

Public Types
typedef vtkImageSpatialAlgorithm	Superclass

Public Types inherited from vtkImageSpatialAlgorithm
typedef vtkThreadedImageAlgorithm	Superclass

Public Types inherited from vtkThreadedImageAlgorithm
typedef vtkImageAlgorithm	Superclass

Public Types inherited from vtkImageAlgorithm
typedef vtkAlgorithm	Superclass

Public Types inherited from vtkAlgorithm
typedef vtkObject	Superclass

enum	DesiredOutputPrecision { SINGLE_PRECISION, DOUBLE_PRECISION, DEFAULT_PRECISION }

Public Types inherited from vtkObject
typedef vtkObjectBase	Superclass

Public Member Functions
virtual int	IsA (const char *type)

vtkImageAnisotropicDiffusion3D *	NewInstance () const

void	PrintSelf (ostream &os, vtkIndent indent)

void	SetNumberOfIterations (int num)


virtual int	GetNumberOfIterations ()


virtual void	SetDiffusionThreshold (double)

virtual double	GetDiffusionThreshold ()


virtual void	SetDiffusionFactor (double)

virtual double	GetDiffusionFactor ()


virtual void	SetFaces (int)

virtual int	GetFaces ()

virtual void	FacesOn ()

virtual void	FacesOff ()

virtual void	SetEdges (int)

virtual int	GetEdges ()

virtual void	EdgesOn ()

virtual void	EdgesOff ()

virtual void	SetCorners (int)

virtual int	GetCorners ()

virtual void	CornersOn ()

virtual void	CornersOff ()


virtual void	SetGradientMagnitudeThreshold (int)

virtual int	GetGradientMagnitudeThreshold ()

virtual void	GradientMagnitudeThresholdOn ()

virtual void	GradientMagnitudeThresholdOff ()

Public Member Functions inherited from vtkImageSpatialAlgorithm
vtkImageSpatialAlgorithm *	NewInstance () const

void	PrintSelf (ostream &os, vtkIndent indent)

virtual int *	GetKernelSize ()

virtual void	GetKernelSize (int &, int &, int &)

virtual void	GetKernelSize (int[3])

virtual int *	GetKernelMiddle ()

virtual void	GetKernelMiddle (int &, int &, int &)

virtual void	GetKernelMiddle (int[3])

Public Member Functions inherited from vtkThreadedImageAlgorithm
vtkThreadedImageAlgorithm *	NewInstance () const

virtual void	ThreadedExecute (vtkImageData inData, vtkImageData outData, int extent[6], int threadId)

virtual void	SetNumberOfThreads (int)

virtual int	GetNumberOfThreads ()

virtual int	SplitExtent (int splitExt[6], int startExt[6], int num, int total)

Public Member Functions inherited from vtkImageAlgorithm
vtkImageAlgorithm *	NewInstance () const

vtkImageData *	GetOutput ()

vtkImageData *	GetOutput (int)

virtual void	SetOutput (vtkDataObject *d)

virtual int	ProcessRequest (vtkInformation , vtkInformationVector , vtkInformationVector )

void	SetInputData (vtkDataObject *)

void	SetInputData (int, vtkDataObject *)

vtkDataObject *	GetInput (int port)

vtkDataObject *	GetInput ()

vtkImageData *	GetImageDataInput (int port)

virtual void	AddInputData (vtkDataObject *)

virtual void	AddInputData (int, vtkDataObject *)

Public Member Functions inherited from vtkAlgorithm
vtkAlgorithm *	NewInstance () const

int	HasExecutive ()

vtkExecutive *	GetExecutive ()

virtual void	SetExecutive (vtkExecutive *executive)

virtual int	ModifyRequest (vtkInformation *request, int when)

vtkInformation *	GetInputPortInformation (int port)

vtkInformation *	GetOutputPortInformation (int port)

int	GetNumberOfInputPorts ()

int	GetNumberOfOutputPorts ()

void	UpdateProgress (double amount)

vtkInformation *	GetInputArrayInformation (int idx)

void	RemoveAllInputs ()

vtkDataObject *	GetOutputDataObject (int port)

virtual void	RemoveInputConnection (int port, vtkAlgorithmOutput *input)

virtual void	RemoveInputConnection (int port, int idx)

virtual void	RemoveAllInputConnections (int port)

int	GetNumberOfInputConnections (int port)

int	GetTotalNumberOfInputConnections ()

vtkAlgorithmOutput *	GetInputConnection (int port, int index)

vtkAlgorithm *	GetInputAlgorithm (int port, int index, int &algPort)

vtkAlgorithm *	GetInputAlgorithm (int port, int index)

vtkExecutive *	GetInputExecutive (int port, int index)

vtkInformation *	GetInputInformation (int port, int index)

vtkInformation *	GetOutputInformation (int port)

virtual void	UpdateInformation ()

virtual void	UpdateDataObject ()

virtual void	PropagateUpdateExtent ()

virtual void	UpdateWholeExtent ()

void	ConvertTotalInputToPortConnection (int ind, int &port, int &conn)

int	SetUpdateExtentToWholeExtent (int port)

int	SetUpdateExtentToWholeExtent ()

void	SetUpdateExtent (int port, int extent[6])

int	ProcessRequest (vtkInformation request, vtkCollection inInfo, vtkInformationVector *outInfo)

virtual int	ComputePipelineMTime (vtkInformation request, vtkInformationVector inInfoVec, vtkInformationVector outInfoVec, int requestFromOutputPort, unsigned long *mtime)

virtual vtkInformation *	GetInformation ()

virtual void	SetInformation (vtkInformation *)

virtual void	Register (vtkObjectBase *o)

virtual void	UnRegister (vtkObjectBase *o)

virtual void	SetAbortExecute (int)

virtual int	GetAbortExecute ()

virtual void	AbortExecuteOn ()

virtual void	AbortExecuteOff ()

virtual void	SetProgress (double)

virtual double	GetProgress ()

void	SetProgressText (const char *ptext)

virtual char *	GetProgressText ()

virtual unsigned long	GetErrorCode ()

virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, const char *name)

virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, int fieldAttributeType)

virtual void	SetInputArrayToProcess (int idx, vtkInformation *info)

virtual void	SetInputArrayToProcess (int idx, int port, int connection, const char fieldAssociation, const char attributeTypeorName)

vtkDataObject *	GetInputDataObject (int port, int connection)

virtual void	SetInputConnection (int port, vtkAlgorithmOutput *input)

virtual void	SetInputConnection (vtkAlgorithmOutput *input)

virtual void	AddInputConnection (int port, vtkAlgorithmOutput *input)

virtual void	AddInputConnection (vtkAlgorithmOutput *input)

virtual void	SetInputDataObject (int port, vtkDataObject *data)

virtual void	SetInputDataObject (vtkDataObject *data)

virtual void	AddInputDataObject (int port, vtkDataObject *data)

virtual void	AddInputDataObject (vtkDataObject *data)

vtkAlgorithmOutput *	GetOutputPort (int index)

vtkAlgorithmOutput *	GetOutputPort ()

vtkAlgorithm *	GetInputAlgorithm ()

vtkExecutive *	GetInputExecutive ()

vtkInformation *	GetInputInformation ()

virtual void	Update (int port)

virtual void	Update ()

virtual void	SetReleaseDataFlag (int)

virtual int	GetReleaseDataFlag ()

void	ReleaseDataFlagOn ()

void	ReleaseDataFlagOff ()

int	UpdateExtentIsEmpty (vtkInformation pinfo, vtkDataObject output)

int	UpdateExtentIsEmpty (vtkInformation *pinfo, int extentType)

void	SetUpdateExtent (int port, int piece, int numPieces, int ghostLevel)

void	SetUpdateExtent (int piece, int numPieces, int ghostLevel)

void	SetUpdateExtent (int extent[6])

int *	GetUpdateExtent ()

int *	GetUpdateExtent (int port)

void	GetUpdateExtent (int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)

void	GetUpdateExtent (int port, int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)

void	GetUpdateExtent (int extent[6])

void	GetUpdateExtent (int port, int extent[6])

int	GetUpdatePiece ()

int	GetUpdatePiece (int port)

int	GetUpdateNumberOfPieces ()

int	GetUpdateNumberOfPieces (int port)

int	GetUpdateGhostLevel ()

int	GetUpdateGhostLevel (int port)

void	SetProgressObserver (vtkProgressObserver *)

virtual vtkProgressObserver *	GetProgressObserver ()

Public Member Functions inherited from vtkObject
vtkObject *	NewInstance () const

virtual void	DebugOn ()

virtual void	DebugOff ()

bool	GetDebug ()

void	SetDebug (bool debugFlag)

virtual void	Modified ()

virtual unsigned long	GetMTime ()

unsigned long	AddObserver (unsigned long event, vtkCommand *, float priority=0.0f)

unsigned long	AddObserver (const char event, vtkCommand , float priority=0.0f)

vtkCommand *	GetCommand (unsigned long tag)

void	RemoveObserver (vtkCommand *)

void	RemoveObservers (unsigned long event, vtkCommand *)

void	RemoveObservers (const char event, vtkCommand )

int	HasObserver (unsigned long event, vtkCommand *)

int	HasObserver (const char event, vtkCommand )

void	RemoveObserver (unsigned long tag)

void	RemoveObservers (unsigned long event)

void	RemoveObservers (const char *event)

void	RemoveAllObservers ()

int	HasObserver (unsigned long event)

int	HasObserver (const char *event)

template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, void(T::*callback)(), float priority=0.0f)

template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, void(T::callback)(vtkObject , unsigned long, void *), float priority=0.0f)

template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, bool(T::callback)(vtkObject , unsigned long, void *), float priority=0.0f)

int	InvokeEvent (unsigned long event, void *callData)

int	InvokeEvent (const char event, void callData)

int	InvokeEvent (unsigned long event)

int	InvokeEvent (const char *event)

Public Member Functions inherited from vtkObjectBase
const char *	GetClassName () const

virtual void	Delete ()

virtual void	FastDelete ()

void	Print (ostream &os)

void	SetReferenceCount (int)

void	PrintRevisions (ostream &)

virtual void	PrintHeader (ostream &os, vtkIndent indent)

virtual void	PrintTrailer (ostream &os, vtkIndent indent)

int	GetReferenceCount ()

Static Public Member Functions
static vtkImageAnisotropicDiffusion3D *	New ()

static int	IsTypeOf (const char *type)

static vtkImageAnisotropicDiffusion3D *	SafeDownCast (vtkObjectBase *o)

Static Public Member Functions inherited from vtkImageSpatialAlgorithm
static vtkImageSpatialAlgorithm *	New ()

static int	IsTypeOf (const char *type)

static vtkImageSpatialAlgorithm *	SafeDownCast (vtkObjectBase *o)

Static Public Member Functions inherited from vtkThreadedImageAlgorithm
static int	IsTypeOf (const char *type)

static vtkThreadedImageAlgorithm *	SafeDownCast (vtkObjectBase *o)

Static Public Member Functions inherited from vtkImageAlgorithm
static int	IsTypeOf (const char *type)

static vtkImageAlgorithm *	SafeDownCast (vtkObjectBase *o)

Static Public Member Functions inherited from vtkAlgorithm
static vtkAlgorithm *	New ()

static int	IsTypeOf (const char *type)

static vtkAlgorithm *	SafeDownCast (vtkObjectBase *o)

static vtkInformationIntegerKey *	INPUT_IS_OPTIONAL ()

static vtkInformationIntegerKey *	INPUT_IS_REPEATABLE ()

static vtkInformationInformationVectorKey *	INPUT_REQUIRED_FIELDS ()

static vtkInformationStringVectorKey *	INPUT_REQUIRED_DATA_TYPE ()

static vtkInformationInformationVectorKey *	INPUT_ARRAYS_TO_PROCESS ()

static vtkInformationIntegerKey *	INPUT_PORT ()

static vtkInformationIntegerKey *	INPUT_CONNECTION ()

static vtkInformationIntegerKey *	CAN_PRODUCE_SUB_EXTENT ()

static vtkInformationIntegerKey *	CAN_HANDLE_PIECE_REQUEST ()

static void	SetDefaultExecutivePrototype (vtkExecutive *proto)

Static Public Member Functions inherited from vtkObject
static int	IsTypeOf (const char *type)

static vtkObject *	SafeDownCast (vtkObjectBase *o)

static vtkObject *	New ()

static void	BreakOnError ()

static void	SetGlobalWarningDisplay (int val)

static void	GlobalWarningDisplayOn ()

static void	GlobalWarningDisplayOff ()

static int	GetGlobalWarningDisplay ()

Static Public Member Functions inherited from vtkObjectBase
static int	IsTypeOf (const char *name)

static vtkObjectBase *	New ()

Protected Member Functions
virtual vtkObjectBase *	NewInstanceInternal () const

	vtkImageAnisotropicDiffusion3D ()

	~vtkImageAnisotropicDiffusion3D ()

void	ThreadedRequestData (vtkInformation request, vtkInformationVector inputVector, vtkInformationVector outputVector, vtkImageData *inData, vtkImageData outData, int extent[6], int id)

void	Iterate (vtkImageData in, vtkImageData out, double ar0, double ar1, double ar3, int *coreExtent, int count)

Protected Member Functions inherited from vtkImageSpatialAlgorithm
	vtkImageSpatialAlgorithm ()

	~vtkImageSpatialAlgorithm ()

virtual int	RequestInformation (vtkInformation , vtkInformationVector , vtkInformationVector )

void	ComputeOutputWholeExtent (int extent[6], int handleBoundaries)

virtual int	RequestUpdateExtent (vtkInformation , vtkInformationVector , vtkInformationVector )

void	InternalRequestUpdateExtent (int extent, int inExtent, int *wholeExtent)

Protected Member Functions inherited from vtkThreadedImageAlgorithm
	vtkThreadedImageAlgorithm ()

	~vtkThreadedImageAlgorithm ()

virtual int	RequestData (vtkInformation request, vtkInformationVector inputVector, vtkInformationVector outputVector)

Protected Member Functions inherited from vtkImageAlgorithm
	vtkImageAlgorithm ()

	~vtkImageAlgorithm ()

virtual void	CopyInputArrayAttributesToOutput (vtkInformation request, vtkInformationVector inputVector, vtkInformationVector outputVector)

virtual void	ExecuteDataWithInformation (vtkDataObject output, vtkInformation outInfo)

virtual void	ExecuteData (vtkDataObject *output)

virtual void	Execute ()

virtual void	AllocateOutputData (vtkImageData out, vtkInformation outInfo, int *uExtent)

virtual vtkImageData *	AllocateOutputData (vtkDataObject out, vtkInformation outInfo)

virtual void	CopyAttributeData (vtkImageData in, vtkImageData out, vtkInformationVector **inputVector)

virtual int	FillOutputPortInformation (int port, vtkInformation *info)

virtual int	FillInputPortInformation (int port, vtkInformation *info)

Protected Member Functions inherited from vtkAlgorithm
	vtkAlgorithm ()

	~vtkAlgorithm ()

virtual void	SetNumberOfInputPorts (int n)

virtual void	SetNumberOfOutputPorts (int n)

int	InputPortIndexInRange (int index, const char *action)

int	OutputPortIndexInRange (int index, const char *action)

int	GetInputArrayAssociation (int idx, vtkInformationVector **inputVector)

virtual vtkExecutive *	CreateDefaultExecutive ()

virtual void	ReportReferences (vtkGarbageCollector *)

virtual void	SetNumberOfInputConnections (int port, int n)

int	GetInputArrayAssociation (int idx, int connection, vtkInformationVector **inputVector)

int	GetInputArrayAssociation (int idx, vtkDataObject *input)

vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector)

vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)

vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)

vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)

vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input)

vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input, int &association)

vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector)

vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)

vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)

vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)

vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input)

vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input, int &association)

vtkInformation *	GetInputArrayFieldInformation (int idx, vtkInformationVector **inputVector)

virtual void	SetNthInputConnection (int port, int index, vtkAlgorithmOutput *input)

void	SetInputDataInternal (int port, vtkDataObject *input)

void	AddInputDataInternal (int port, vtkDataObject *input)

virtual void	SetErrorCode (unsigned long)

Protected Member Functions inherited from vtkObject
	vtkObject ()

virtual	~vtkObject ()

virtual void	RegisterInternal (vtkObjectBase *, int check)

virtual void	UnRegisterInternal (vtkObjectBase *, int check)

void	InternalGrabFocus (vtkCommand mouseEvents, vtkCommand keypressEvents=NULL)

void	InternalReleaseFocus ()

Protected Member Functions inherited from vtkObjectBase
	vtkObjectBase ()

virtual	~vtkObjectBase ()

virtual void	CollectRevisions (ostream &)

	vtkObjectBase (const vtkObjectBase &)

void	operator= (const vtkObjectBase &)

Protected Attributes
int	NumberOfIterations

double	DiffusionThreshold

double	DiffusionFactor

int	Faces

int	Edges

int	Corners

int	GradientMagnitudeThreshold

Protected Attributes inherited from vtkImageSpatialAlgorithm
int	KernelSize [3]

int	KernelMiddle [3]

int	HandleBoundaries

Protected Attributes inherited from vtkThreadedImageAlgorithm
vtkMultiThreader *	Threader

int	NumberOfThreads

Protected Attributes inherited from vtkAlgorithm
vtkInformation *	Information

double	Progress

char *	ProgressText

vtkProgressObserver *	ProgressObserver

unsigned long	ErrorCode

Protected Attributes inherited from vtkObject
bool	Debug

vtkTimeStamp	MTime

vtkSubjectHelper *	SubjectHelper

Protected Attributes inherited from vtkObjectBase
vtkAtomicInt32	ReferenceCount

vtkWeakPointerBase **	WeakPointers

Additional Inherited Members
Public Attributes inherited from vtkAlgorithm
int	AbortExecute

Static Protected Member Functions inherited from vtkAlgorithm
static vtkInformationIntegerKey *	PORT_REQUIREMENTS_FILLED ()

Static Protected Attributes inherited from vtkAlgorithm
static vtkExecutive *	DefaultExecutivePrototype

Detailed Description

edge preserving smoothing.

vtkImageAnisotropicDiffusion3D diffuses an volume iteratively. The neighborhood of the diffusion is determined by the instance flags. if "Faces" is on, the 6 voxels adjoined by faces are included in the neighborhood. If "Edges" is on the 12 edge connected voxels are included, and if "Corners" is on, the 8 corner connected voxels are included. "DiffusionFactor" determines how far a pixel value moves toward its neighbors, and is insensitive to the number of neighbors chosen. The diffusion is anisotropic because it only occurs when a gradient measure is below "GradientThreshold". Two gradient measures exist and are toggled by the "GradientMagnitudeThreshold" flag. When "GradientMagnitudeThreshold" is on, the magnitude of the gradient, computed by central differences, above "DiffusionThreshold" a voxel is not modified. The alternative measure examines each neighbor independently. The gradient between the voxel and the neighbor must be below the "DiffusionThreshold" for diffusion to occur with THAT neighbor.

See also: vtkImageAnisotropicDiffusion2D

Tests:: vtkImageAnisotropicDiffusion3D (Tests)

Definition at line 50 of file vtkImageAnisotropicDiffusion3D.h.

Member Typedef Documentation

typedef vtkImageSpatialAlgorithm vtkImageAnisotropicDiffusion3D::Superclass

Definition at line 54 of file vtkImageAnisotropicDiffusion3D.h.

Constructor & Destructor Documentation

vtkImageAnisotropicDiffusion3D::vtkImageAnisotropicDiffusion3D ( )

protected

vtkImageAnisotropicDiffusion3D::~vtkImageAnisotropicDiffusion3D ( )

inlineprotected

Definition at line 109 of file vtkImageAnisotropicDiffusion3D.h.

Member Function Documentation

static vtkImageAnisotropicDiffusion3D* vtkImageAnisotropicDiffusion3D::New ( )

static

static int vtkImageAnisotropicDiffusion3D::IsTypeOf ( const char * type )

static

virtual int vtkImageAnisotropicDiffusion3D::IsA ( const char * name )

virtual

Return 1 if this class is the same type of (or a subclass of) the named class. Returns 0 otherwise. This method works in combination with vtkTypeMacro found in vtkSetGet.h.

Reimplemented from vtkImageSpatialAlgorithm.

static vtkImageAnisotropicDiffusion3D* vtkImageAnisotropicDiffusion3D::SafeDownCast ( vtkObjectBase * o )

static

virtual vtkObjectBase* vtkImageAnisotropicDiffusion3D::NewInstanceInternal ( ) const

protectedvirtual

Reimplemented from vtkImageSpatialAlgorithm.

vtkImageAnisotropicDiffusion3D* vtkImageAnisotropicDiffusion3D::NewInstance ( ) const

void vtkImageAnisotropicDiffusion3D::PrintSelf	(	ostream &	os,
		vtkIndent	indent
	)

virtual

Methods invoked by print to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from vtkThreadedImageAlgorithm.

void vtkImageAnisotropicDiffusion3D::SetNumberOfIterations ( int num )

This method sets the number of interations which also affects the input neighborhood needed to compute one output pixel. Each iterations requires an extra pixel layer on the neighborhood. This is only relavent when you are trying to stream or are requesting a sub extent of the "wholeExtent".

virtual int vtkImageAnisotropicDiffusion3D::GetNumberOfIterations ( )

virtual

Get the number of iterations.

virtual void vtkImageAnisotropicDiffusion3D::SetDiffusionThreshold ( double )

virtual

Set/Get the difference threshold that stops diffusion. when the difference between two pixel is greater than this threshold, the pixels are not diffused. This causes diffusion to avoid sharp edges. If the GradientMagnitudeThreshold is set, then gradient magnitude is used for comparison instead of pixel differences.

virtual double vtkImageAnisotropicDiffusion3D::GetDiffusionThreshold ( )

virtual

Set/Get the difference threshold that stops diffusion. when the difference between two pixel is greater than this threshold, the pixels are not diffused. This causes diffusion to avoid sharp edges. If the GradientMagnitudeThreshold is set, then gradient magnitude is used for comparison instead of pixel differences.

virtual void vtkImageAnisotropicDiffusion3D::SetDiffusionFactor ( double )

virtual

Set/Get the difference factor

virtual double vtkImageAnisotropicDiffusion3D::GetDiffusionFactor ( )

virtual

Set/Get the difference factor

virtual void vtkImageAnisotropicDiffusion3D::SetFaces ( int )

virtual