A writer for MINC files. More...

#include <vtkMINCImageWriter.h>

Inheritance diagram for vtkMINCImageWriter:

Collaboration diagram for vtkMINCImageWriter:

Public Types
typedef vtkImageWriter	Superclass

Public Types inherited from vtkImageWriter
typedef vtkImageAlgorithm	Superclass

Public Types inherited from vtkImageAlgorithm
typedef vtkAlgorithm	Superclass

Public Types inherited from vtkAlgorithm
typedef vtkObject	Superclass

enum	DesiredOutputPrecision { SINGLE_PRECISION, DOUBLE_PRECISION, DEFAULT_PRECISION }

Public Types inherited from vtkObject
typedef vtkObjectBase	Superclass

Public Member Functions
virtual int	IsA (const char *type)

vtkMINCImageWriter *	NewInstance () const

virtual void	PrintSelf (ostream &os, vtkIndent indent)

virtual void	SetFileName (const char *name)

virtual void	Write ()


virtual const char *	GetFileExtensions ()


virtual const char *	GetDescriptiveName ()


virtual void	SetDirectionCosines (vtkMatrix4x4 *matrix)

virtual vtkMatrix4x4 *	GetDirectionCosines ()


virtual void	SetRescaleSlope (double)

virtual double	GetRescaleSlope ()

virtual void	SetRescaleIntercept (double)

virtual double	GetRescaleIntercept ()


virtual void	SetImageAttributes (vtkMINCImageAttributes *attributes)

virtual vtkMINCImageAttributes *	GetImageAttributes ()


virtual void	SetStrictValidation (int)

virtual void	StrictValidationOn ()

virtual void	StrictValidationOff ()

virtual int	GetStrictValidation ()


virtual void	SetHistoryAddition (const char *)

virtual char *	GetHistoryAddition ()

Public Member Functions inherited from vtkImageWriter
vtkImageWriter *	NewInstance () const

void	DeleteFiles ()

virtual char *	GetFileName ()

virtual void	SetFilePrefix (const char *)

virtual char *	GetFilePrefix ()

virtual void	SetFilePattern (const char *)

virtual char *	GetFilePattern ()

virtual void	SetFileDimensionality (int)

virtual int	GetFileDimensionality ()

vtkImageData *	GetInput ()

Public Member Functions inherited from vtkImageAlgorithm
vtkImageAlgorithm *	NewInstance () const

vtkImageData *	GetOutput ()

vtkImageData *	GetOutput (int)

virtual void	SetOutput (vtkDataObject *d)

virtual int	ProcessRequest (vtkInformation , vtkInformationVector , vtkInformationVector )

void	SetInputData (vtkDataObject *)

void	SetInputData (int, vtkDataObject *)

vtkDataObject *	GetInput (int port)

vtkDataObject *	GetInput ()

vtkImageData *	GetImageDataInput (int port)

virtual void	AddInputData (vtkDataObject *)

virtual void	AddInputData (int, vtkDataObject *)

Public Member Functions inherited from vtkAlgorithm
vtkAlgorithm *	NewInstance () const

int	HasExecutive ()

vtkExecutive *	GetExecutive ()

virtual void	SetExecutive (vtkExecutive *executive)

virtual int	ModifyRequest (vtkInformation *request, int when)

vtkInformation *	GetInputPortInformation (int port)

vtkInformation *	GetOutputPortInformation (int port)

int	GetNumberOfInputPorts ()

int	GetNumberOfOutputPorts ()

void	UpdateProgress (double amount)

vtkInformation *	GetInputArrayInformation (int idx)

void	RemoveAllInputs ()

vtkDataObject *	GetOutputDataObject (int port)

virtual void	RemoveInputConnection (int port, vtkAlgorithmOutput *input)

virtual void	RemoveInputConnection (int port, int idx)

virtual void	RemoveAllInputConnections (int port)

int	GetNumberOfInputConnections (int port)

int	GetTotalNumberOfInputConnections ()

vtkAlgorithmOutput *	GetInputConnection (int port, int index)

vtkAlgorithm *	GetInputAlgorithm (int port, int index, int &algPort)

vtkAlgorithm *	GetInputAlgorithm (int port, int index)

vtkExecutive *	GetInputExecutive (int port, int index)

vtkInformation *	GetInputInformation (int port, int index)

vtkInformation *	GetOutputInformation (int port)

virtual void	UpdateInformation ()

virtual void	UpdateDataObject ()

virtual void	PropagateUpdateExtent ()

virtual void	UpdateWholeExtent ()

void	ConvertTotalInputToPortConnection (int ind, int &port, int &conn)

int	SetUpdateExtentToWholeExtent (int port)

int	SetUpdateExtentToWholeExtent ()

void	SetUpdateExtent (int port, int extent[6])

int	ProcessRequest (vtkInformation request, vtkCollection inInfo, vtkInformationVector *outInfo)

virtual int	ComputePipelineMTime (vtkInformation request, vtkInformationVector inInfoVec, vtkInformationVector outInfoVec, int requestFromOutputPort, unsigned long *mtime)

virtual vtkInformation *	GetInformation ()

virtual void	SetInformation (vtkInformation *)

virtual void	Register (vtkObjectBase *o)

virtual void	UnRegister (vtkObjectBase *o)

virtual void	SetAbortExecute (int)

virtual int	GetAbortExecute ()

virtual void	AbortExecuteOn ()

virtual void	AbortExecuteOff ()

virtual void	SetProgress (double)

virtual double	GetProgress ()

void	SetProgressText (const char *ptext)

virtual char *	GetProgressText ()

virtual unsigned long	GetErrorCode ()

virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, const char *name)

virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, int fieldAttributeType)

virtual void	SetInputArrayToProcess (int idx, vtkInformation *info)

virtual void	SetInputArrayToProcess (int idx, int port, int connection, const char fieldAssociation, const char attributeTypeorName)

vtkDataObject *	GetInputDataObject (int port, int connection)

virtual void	SetInputConnection (int port, vtkAlgorithmOutput *input)

virtual void	SetInputConnection (vtkAlgorithmOutput *input)

virtual void	AddInputConnection (int port, vtkAlgorithmOutput *input)

virtual void	AddInputConnection (vtkAlgorithmOutput *input)

virtual void	SetInputDataObject (int port, vtkDataObject *data)

virtual void	SetInputDataObject (vtkDataObject *data)

virtual void	AddInputDataObject (int port, vtkDataObject *data)

virtual void	AddInputDataObject (vtkDataObject *data)

vtkAlgorithmOutput *	GetOutputPort (int index)

vtkAlgorithmOutput *	GetOutputPort ()

vtkAlgorithm *	GetInputAlgorithm ()

vtkExecutive *	GetInputExecutive ()

vtkInformation *	GetInputInformation ()

virtual void	Update (int port)

virtual void	Update ()

virtual void	SetReleaseDataFlag (int)

virtual int	GetReleaseDataFlag ()

void	ReleaseDataFlagOn ()

void	ReleaseDataFlagOff ()

int	UpdateExtentIsEmpty (vtkInformation pinfo, vtkDataObject output)

int	UpdateExtentIsEmpty (vtkInformation *pinfo, int extentType)

void	SetUpdateExtent (int port, int piece, int numPieces, int ghostLevel)

void	SetUpdateExtent (int piece, int numPieces, int ghostLevel)

void	SetUpdateExtent (int extent[6])

int *	GetUpdateExtent ()

int *	GetUpdateExtent (int port)

void	GetUpdateExtent (int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)

void	GetUpdateExtent (int port, int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)

void	GetUpdateExtent (int extent[6])

void	GetUpdateExtent (int port, int extent[6])

int	GetUpdatePiece ()

int	GetUpdatePiece (int port)

int	GetUpdateNumberOfPieces ()

int	GetUpdateNumberOfPieces (int port)

int	GetUpdateGhostLevel ()

int	GetUpdateGhostLevel (int port)

void	SetProgressObserver (vtkProgressObserver *)

virtual vtkProgressObserver *	GetProgressObserver ()

Public Member Functions inherited from vtkObject
vtkObject *	NewInstance () const

virtual void	DebugOn ()

virtual void	DebugOff ()

bool	GetDebug ()

void	SetDebug (bool debugFlag)

virtual void	Modified ()

virtual unsigned long	GetMTime ()

unsigned long	AddObserver (unsigned long event, vtkCommand *, float priority=0.0f)

unsigned long	AddObserver (const char event, vtkCommand , float priority=0.0f)

vtkCommand *	GetCommand (unsigned long tag)

void	RemoveObserver (vtkCommand *)

void	RemoveObservers (unsigned long event, vtkCommand *)

void	RemoveObservers (const char event, vtkCommand )

int	HasObserver (unsigned long event, vtkCommand *)

int	HasObserver (const char event, vtkCommand )

void	RemoveObserver (unsigned long tag)

void	RemoveObservers (unsigned long event)

void	RemoveObservers (const char *event)

void	RemoveAllObservers ()

int	HasObserver (unsigned long event)

int	HasObserver (const char *event)

template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, void(T::*callback)(), float priority=0.0f)

template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, void(T::callback)(vtkObject , unsigned long, void *), float priority=0.0f)

template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, bool(T::callback)(vtkObject , unsigned long, void *), float priority=0.0f)

int	InvokeEvent (unsigned long event, void *callData)

int	InvokeEvent (const char event, void callData)

int	InvokeEvent (unsigned long event)

int	InvokeEvent (const char *event)

Public Member Functions inherited from vtkObjectBase
const char *	GetClassName () const

virtual void	Delete ()

virtual void	FastDelete ()

void	Print (ostream &os)

void	SetReferenceCount (int)

void	PrintRevisions (ostream &)

virtual void	PrintHeader (ostream &os, vtkIndent indent)

virtual void	PrintTrailer (ostream &os, vtkIndent indent)

int	GetReferenceCount ()

Static Public Member Functions
static int	IsTypeOf (const char *type)

static vtkMINCImageWriter *	SafeDownCast (vtkObjectBase *o)

static vtkMINCImageWriter *	New ()

Static Public Member Functions inherited from vtkImageWriter
static vtkImageWriter *	New ()

static int	IsTypeOf (const char *type)

static vtkImageWriter *	SafeDownCast (vtkObjectBase *o)

Static Public Member Functions inherited from vtkImageAlgorithm
static int	IsTypeOf (const char *type)

static vtkImageAlgorithm *	SafeDownCast (vtkObjectBase *o)

Static Public Member Functions inherited from vtkAlgorithm
static vtkAlgorithm *	New ()

static int	IsTypeOf (const char *type)

static vtkAlgorithm *	SafeDownCast (vtkObjectBase *o)

static vtkInformationIntegerKey *	INPUT_IS_OPTIONAL ()

static vtkInformationIntegerKey *	INPUT_IS_REPEATABLE ()

static vtkInformationInformationVectorKey *	INPUT_REQUIRED_FIELDS ()

static vtkInformationStringVectorKey *	INPUT_REQUIRED_DATA_TYPE ()

static vtkInformationInformationVectorKey *	INPUT_ARRAYS_TO_PROCESS ()

static vtkInformationIntegerKey *	INPUT_PORT ()

static vtkInformationIntegerKey *	INPUT_CONNECTION ()

static vtkInformationIntegerKey *	CAN_PRODUCE_SUB_EXTENT ()

static vtkInformationIntegerKey *	CAN_HANDLE_PIECE_REQUEST ()

static void	SetDefaultExecutivePrototype (vtkExecutive *proto)

Static Public Member Functions inherited from vtkObject
static int	IsTypeOf (const char *type)

static vtkObject *	SafeDownCast (vtkObjectBase *o)

static vtkObject *	New ()

static void	BreakOnError ()

static void	SetGlobalWarningDisplay (int val)

static void	GlobalWarningDisplayOn ()

static void	GlobalWarningDisplayOff ()

static int	GetGlobalWarningDisplay ()

Static Public Member Functions inherited from vtkObjectBase
static int	IsTypeOf (const char *name)

static vtkObjectBase *	New ()

Protected Member Functions
virtual vtkObjectBase *	NewInstanceInternal () const

	vtkMINCImageWriter ()

	~vtkMINCImageWriter ()

virtual int	OpenNetCDFFile (const char *filename, int &ncid)

virtual int	CloseNetCDFFile (int ncid)

virtual int	IndexFromDimensionName (const char *dimName)

virtual void	ComputePermutationFromOrientation (int permutation[3], int flip[3])

virtual int	CreateMINCDimensions (vtkImageData input, int timeStep, int dimids)

virtual int	CreateMINCVariables (vtkImageData input, int timeStep, int dimids)

virtual int	WriteMINCFileAttributes (vtkImageData *input, int timeStep)

virtual int	WriteMINCData (vtkImageData *input, int frameNumber, int wholeExt[6], int upExt[6])

virtual void	FindRescale (double &rescaleSlope, double &rescaleIntercept)

virtual void	FindMINCValidRange (double range[2])

virtual int	FillInputPortInformation (int port, vtkInformation *info)

virtual int	RequestInformation (vtkInformation request, vtkInformationVector inputVector, vtkInformationVector outputVector)

virtual int	RequestUpdateExtent (vtkInformation request, vtkInformationVector inputVector, vtkInformationVector outputVector)

virtual int	RequestData (vtkInformation request, vtkInformationVector inputVector, vtkInformationVector outputVector)

Protected Member Functions inherited from vtkImageWriter
	vtkImageWriter ()

	~vtkImageWriter ()

virtual void	RecursiveWrite (int dim, vtkImageData region, vtkInformation inInfo, ofstream *file)

virtual void	RecursiveWrite (int dim, vtkImageData cache, vtkImageData data, vtkInformation inInfo, ofstream file)

virtual void	WriteFile (ofstream file, vtkImageData data, int extent[6], int wExtent[6])

virtual void	WriteFileHeader (ofstream , vtkImageData , int[6])

virtual void	WriteFileTrailer (ofstream , vtkImageData )

Protected Member Functions inherited from vtkImageAlgorithm
	vtkImageAlgorithm ()

	~vtkImageAlgorithm ()

virtual void	CopyInputArrayAttributesToOutput (vtkInformation request, vtkInformationVector inputVector, vtkInformationVector outputVector)

virtual void	ExecuteDataWithInformation (vtkDataObject output, vtkInformation outInfo)

virtual void	ExecuteData (vtkDataObject *output)

virtual void	Execute ()

virtual void	AllocateOutputData (vtkImageData out, vtkInformation outInfo, int *uExtent)

virtual vtkImageData *	AllocateOutputData (vtkDataObject out, vtkInformation outInfo)

virtual void	CopyAttributeData (vtkImageData in, vtkImageData out, vtkInformationVector **inputVector)

virtual int	FillOutputPortInformation (int port, vtkInformation *info)

Protected Member Functions inherited from vtkAlgorithm
	vtkAlgorithm ()

	~vtkAlgorithm ()

virtual void	SetNumberOfInputPorts (int n)

virtual void	SetNumberOfOutputPorts (int n)

int	InputPortIndexInRange (int index, const char *action)

int	OutputPortIndexInRange (int index, const char *action)

int	GetInputArrayAssociation (int idx, vtkInformationVector **inputVector)

virtual vtkExecutive *	CreateDefaultExecutive ()

virtual void	ReportReferences (vtkGarbageCollector *)

virtual void	SetNumberOfInputConnections (int port, int n)

int	GetInputArrayAssociation (int idx, int connection, vtkInformationVector **inputVector)

int	GetInputArrayAssociation (int idx, vtkDataObject *input)

vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector)

vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)

vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)

vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)

vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input)

vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input, int &association)

vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector)

vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)

vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)

vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)

vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input)

vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input, int &association)

vtkInformation *	GetInputArrayFieldInformation (int idx, vtkInformationVector **inputVector)

virtual void	SetNthInputConnection (int port, int index, vtkAlgorithmOutput *input)

void	SetInputDataInternal (int port, vtkDataObject *input)

void	AddInputDataInternal (int port, vtkDataObject *input)

virtual void	SetErrorCode (unsigned long)

Protected Member Functions inherited from vtkObject
	vtkObject ()

virtual	~vtkObject ()

virtual void	RegisterInternal (vtkObjectBase *, int check)

virtual void	UnRegisterInternal (vtkObjectBase *, int check)

void	InternalGrabFocus (vtkCommand mouseEvents, vtkCommand keypressEvents=NULL)

void	InternalReleaseFocus ()

Protected Member Functions inherited from vtkObjectBase
	vtkObjectBase ()

virtual	~vtkObjectBase ()

virtual void	CollectRevisions (ostream &)

	vtkObjectBase (const vtkObjectBase &)

void	operator= (const vtkObjectBase &)

Protected Attributes
int	MINCImageType

int	MINCImageTypeSigned

int	MINCImageMinMaxDims

vtkMatrix4x4 *	DirectionCosines

double	RescaleSlope

double	RescaleIntercept

int	StrictValidation

int	DataUpdateExtent [6]

int	FileDataType

double	FileValidRange [2]

double	InternalRescaleSlope

double	InternalRescaleIntercept

int	ComputeValidRangeFromScalarRange

vtkStringArray *	FileDimensionNames

vtkMINCImageAttributes *	ImageAttributes

int	Permutation [3]

int	Flip [3]

int	MismatchedInputs

int	MINCFileId

char *	HistoryAddition

Protected Attributes inherited from vtkImageWriter
int	FileDimensionality

char *	FilePrefix

char *	FilePattern

char *	FileName

int	FileNumber

int	FileLowerLeft

char *	InternalFileName

int	MinimumFileNumber

int	MaximumFileNumber

int	FilesDeleted

Protected Attributes inherited from vtkAlgorithm
vtkInformation *	Information

double	Progress

char *	ProgressText

vtkProgressObserver *	ProgressObserver

unsigned long	ErrorCode

Protected Attributes inherited from vtkObject
bool	Debug

vtkTimeStamp	MTime

vtkSubjectHelper *	SubjectHelper

Protected Attributes inherited from vtkObjectBase
vtkAtomicInt32	ReferenceCount

vtkWeakPointerBase **	WeakPointers

Additional Inherited Members
Public Attributes inherited from vtkAlgorithm
int	AbortExecute

Static Protected Member Functions inherited from vtkAlgorithm
static vtkInformationIntegerKey *	PORT_REQUIREMENTS_FILLED ()

Static Protected Attributes inherited from vtkAlgorithm
static vtkExecutive *	DefaultExecutivePrototype

Detailed Description

A writer for MINC files.

MINC is a NetCDF-based medical image file format that was developed at the Montreal Neurological Institute in 1992. The data is written slice-by-slice, and this writer is therefore suitable for streaming MINC data that is larger than the memory size through VTK. This writer can also produce files with up to 4 dimensions, where the fourth dimension is provided by using AddInput() to specify multiple input data sets. If you want to set header information for the file, you must supply a vtkMINCImageAttributes

See also: vtkMINCImageReader vtkMINCImageAttributes

Thanks:: Thanks to David Gobbi for writing this class and Atamai Inc. for contributing it to VTK.

Tests:: vtkMINCImageWriter (Tests)

Definition at line 84 of file vtkMINCImageWriter.h.

Member Typedef Documentation

typedef vtkImageWriter vtkMINCImageWriter::Superclass

Definition at line 87 of file vtkMINCImageWriter.h.

Constructor & Destructor Documentation

vtkMINCImageWriter::vtkMINCImageWriter ( )

protected

vtkMINCImageWriter::~vtkMINCImageWriter ( )

protected

Member Function Documentation

static int vtkMINCImageWriter::IsTypeOf ( const char * type )

static

virtual int vtkMINCImageWriter::IsA ( const char * name )

virtual

Return 1 if this class is the same type of (or a subclass of) the named class. Returns 0 otherwise. This method works in combination with vtkTypeMacro found in vtkSetGet.h.

Reimplemented from vtkImageWriter.

static vtkMINCImageWriter* vtkMINCImageWriter::SafeDownCast ( vtkObjectBase * o )

static

virtual vtkObjectBase* vtkMINCImageWriter::NewInstanceInternal ( ) const

protectedvirtual

Reimplemented from vtkImageWriter.

vtkMINCImageWriter* vtkMINCImageWriter::NewInstance ( ) const

static vtkMINCImageWriter* vtkMINCImageWriter::New ( )

static

virtual void vtkMINCImageWriter::PrintSelf	(	ostream &	os,
		vtkIndent	indent
	)

virtual

Methods invoked by print to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from vtkImageWriter.

virtual const char* vtkMINCImageWriter::GetFileExtensions ( )

inlinevirtual

Get the entension for this file format.

Definition at line 94 of file vtkMINCImageWriter.h.

virtual const char* vtkMINCImageWriter::GetDescriptiveName ( )

inlinevirtual

Get the name of this file format.

Definition at line 100 of file vtkMINCImageWriter.h.

virtual void vtkMINCImageWriter::SetFileName ( const char * name )

virtual

Set the file name.

Reimplemented from vtkImageWriter.

virtual void vtkMINCImageWriter::Write ( )

virtual

Write the data. This will attempt to stream the data slice-by-slice through the pipeline and out to the file, unless the whole extent of the input has already been updated.

Reimplemented from vtkImageWriter.

virtual void vtkMINCImageWriter::SetDirectionCosines ( vtkMatrix4x4 * matrix )

virtual

Set a matrix that describes the orientation of the data. The three columns of this matrix should give the unit-vector directions for the VTK x, y and z dimensions respectively. The writer will use this information to determine how to map the VTK dimensions to the canonical MINC dimensions, and if necessary, the writer will re-order one or more dimensions back-to-front to ensure that no MINC dimension ends up with a direction cosines vector whose dot product with the canonical unit vector for that dimension is negative.

virtual vtkMatrix4x4* vtkMINCImageWriter::GetDirectionCosines ( )

virtual

Set a matrix that describes the orientation of the data. The three columns of this matrix should give the unit-vector directions for the VTK x, y and z dimensions respectively. The writer will use this information to determine how to map the VTK dimensions to the canonical MINC dimensions, and if necessary, the writer will re-order one or more dimensions back-to-front to ensure that no MINC dimension ends up with a direction cosines vector whose dot product with the canonical unit vector for that dimension is negative.

virtual void vtkMINCImageWriter::SetRescaleSlope ( double )

virtual

Set the slope and intercept for rescaling the intensities. The default values are zero, which indicates to the reader that no rescaling is to be performed.

virtual double vtkMINCImageWriter::GetRescaleSlope ( )

virtual

Set the slope and intercept for rescaling the intensities. The default values are zero, which indicates to the reader that no rescaling is to be performed.

virtual void vtkMINCImageWriter::SetRescaleIntercept ( double )

virtual

Set the slope and intercept for rescaling the intensities. The default values are zero, which indicates to the reader that no rescaling is to be performed.

virtual double vtkMINCImageWriter::GetRescaleIntercept ( )

virtual

Set the slope and intercept for rescaling the intensities. The default values are zero, which indicates to the reader that no rescaling is to be performed.

virtual void vtkMINCImageWriter::SetImageAttributes ( vtkMINCImageAttributes * attributes )

virtual

Set the image attributes, which contain patient information and other useful metadata.

virtual vtkMINCImageAttributes* vtkMINCImageWriter::GetImageAttributes ( )

inlinevirtual

Set the image attributes, which contain patient information and other useful metadata.

Definition at line 139 of file vtkMINCImageWriter.h.

virtual void vtkMINCImageWriter::SetStrictValidation ( int )

virtual

Set whether to validate that all variable attributes that have been set are ones that are listed in the MINC standard.

virtual void vtkMINCImageWriter::StrictValidationOn ( )

virtual

Set whether to validate that all variable attributes that have been set are ones that are listed in the MINC standard.

virtual void vtkMINCImageWriter::StrictValidationOff ( )

virtual

Set whether to validate that all variable attributes that have been set are ones that are listed in the MINC standard.

virtual int vtkMINCImageWriter::GetStrictValidation ( )

virtual

Set whether to validate that all variable attributes that have been set are ones that are listed in the MINC standard.

virtual void vtkMINCImageWriter::SetHistoryAddition ( const char * )

virtual

Set a string value to append to the history of the file. This string should describe, briefly, how the file was processed.

virtual char* vtkMINCImageWriter::GetHistoryAddition ( )

virtual

Set a string value to append to the history of the file. This string should describe, briefly, how the file was processed.

virtual int vtkMINCImageWriter::OpenNetCDFFile	(	const char *	filename,
		int &	ncid
	)

protectedvirtual

virtual int vtkMINCImageWriter::CloseNetCDFFile ( int ncid )

protectedvirtual

virtual int vtkMINCImageWriter::IndexFromDimensionName ( const char * dimName )

protectedvirtual

virtual void vtkMINCImageWriter::ComputePermutationFromOrientation	(	int	permutation[3],
		int	flip[3]
	)

protectedvirtual

virtual int vtkMINCImageWriter::CreateMINCDimensions	(	vtkImageData *	input,
		int	timeStep,
		int *	dimids
	)

protectedvirtual

virtual int vtkMINCImageWriter::CreateMINCVariables	(	vtkImageData *	input,
		int	timeStep,
		int *	dimids
	)

protectedvirtual

virtual int vtkMINCImageWriter::WriteMINCFileAttributes	(	vtkImageData *	input,
		int	timeStep
	)

protectedvirtual

virtual int vtkMINCImageWriter::WriteMINCData	(	vtkImageData *	input,
		int	frameNumber,
		int	wholeExt[6],
		int	upExt[6]
	)

protectedvirtual

virtual void vtkMINCImageWriter::FindRescale	(	double &	rescaleSlope,
		double &	rescaleIntercept
	)

protectedvirtual

virtual void vtkMINCImageWriter::FindMINCValidRange ( double range[2] )

protectedvirtual

virtual int vtkMINCImageWriter::FillInputPortInformation	(	int	port,
		vtkInformation *	info
	)

protectedvirtual

These method should be reimplemented by subclasses that have more than a single input or single output. See vtkAlgorithm for more information.

Reimplemented from vtkImageAlgorithm.

virtual int vtkMINCImageWriter::RequestInformation	(	vtkInformation *	request,
		vtkInformationVector **	inputVector,
		vtkInformationVector *	outputVector
	)

protectedvirtual

Subclasses can reimplement this method to collect information from their inputs and set information for their outputs.

Reimplemented from vtkImageAlgorithm.

virtual int vtkMINCImageWriter::RequestUpdateExtent	(	vtkInformation *	,
		vtkInformationVector **	,
		vtkInformationVector *
	)

protectedvirtual

Subclasses can reimplement this method to translate the update extent requests from each output port into update extent requests for the input connections.

Reimplemented from vtkImageAlgorithm.

virtual int vtkMINCImageWriter::RequestData	(	vtkInformation *	request,
		vtkInformationVector **	inputVector,
		vtkInformationVector *	outputVector
	)

protectedvirtual

This is called in response to a REQUEST_DATA request from the executive. Subclasses should override either this method or the ExecuteDataWithInformation method in order to generate data for their outputs. For images, the output arrays will already be allocated, so all that is necessary is to fill in the voxel values.

Reimplemented from vtkImageWriter.

Member Data Documentation

int vtkMINCImageWriter::MINCImageType

protected

Definition at line 162 of file vtkMINCImageWriter.h.

int vtkMINCImageWriter::MINCImageTypeSigned

protected

Definition at line 163 of file vtkMINCImageWriter.h.

int vtkMINCImageWriter::MINCImageMinMaxDims

protected

Definition at line 164 of file vtkMINCImageWriter.h.

vtkMatrix4x4* vtkMINCImageWriter::DirectionCosines

protected

Definition at line 166 of file vtkMINCImageWriter.h.

double vtkMINCImageWriter::RescaleSlope

protected

Definition at line 167 of file vtkMINCImageWriter.h.

double vtkMINCImageWriter::RescaleIntercept

protected

Definition at line 168 of file vtkMINCImageWriter.h.

int vtkMINCImageWriter::StrictValidation

protected

Definition at line 169 of file vtkMINCImageWriter.h.

int vtkMINCImageWriter::DataUpdateExtent[6]

protected

Definition at line 170 of file vtkMINCImageWriter.h.

int vtkMINCImageWriter::FileDataType

protected

Definition at line 172 of file vtkMINCImageWriter.h.

double vtkMINCImageWriter::FileValidRange[2]

protected

Definition at line 173 of file vtkMINCImageWriter.h.

double vtkMINCImageWriter::InternalRescaleSlope

protected

Definition at line 174 of file vtkMINCImageWriter.h.

double vtkMINCImageWriter::InternalRescaleIntercept

protected

Definition at line 175 of file vtkMINCImageWriter.h.

int vtkMINCImageWriter::ComputeValidRangeFromScalarRange

protected

Definition at line 177 of file vtkMINCImageWriter.h.

vtkStringArray* vtkMINCImageWriter::FileDimensionNames

protected

Definition at line 179 of file vtkMINCImageWriter.h.

vtkMINCImageAttributes* vtkMINCImageWriter::ImageAttributes

protected

Definition at line 181 of file vtkMINCImageWriter.h.

int vtkMINCImageWriter::Permutation[3]

protected

Definition at line 183 of file vtkMINCImageWriter.h.

int vtkMINCImageWriter::Flip[3]

protected

Definition at line 184 of file vtkMINCImageWriter.h.

int vtkMINCImageWriter::MismatchedInputs

protected

Definition at line 186 of file vtkMINCImageWriter.h.

int vtkMINCImageWriter::MINCFileId

protected

Definition at line 187 of file vtkMINCImageWriter.h.

char* vtkMINCImageWriter::HistoryAddition

protected

Definition at line 189 of file vtkMINCImageWriter.h.

The documentation for this class was generated from the following file:

dox/IO/MINC/vtkMINCImageWriter.h

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Protected Attributes

Additional Inherited Members

Detailed Description

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation