vtkMNITransformWriter Class Reference

A writer for MNI transformation files. More...

#include <vtkMNITransformWriter.h>

Inheritance diagram for vtkMNITransformWriter:

Collaboration diagram for vtkMNITransformWriter:

Public Types
typedef vtkAlgorithm	Superclass
Public Types inherited from vtkAlgorithm
typedef vtkObject	Superclass
enum	DesiredOutputPrecision { SINGLE_PRECISION, DOUBLE_PRECISION, DEFAULT_PRECISION }
Public Types inherited from vtkObject
typedef vtkObjectBase	Superclass

Public Member Functions
virtual int	IsA (const char *type)
vtkMNITransformWriter *	NewInstance () const
virtual void	PrintSelf (ostream &os, vtkIndent indent)
virtual void	AddTransform (vtkAbstractTransform *transform)
virtual int	GetNumberOfTransforms ()
virtual void	Write ()
virtual void	SetFileName (const char *)
virtual char *	GetFileName ()
virtual const char *	GetFileExtensions ()
virtual const char *	GetDescriptiveName ()
virtual void	SetTransform (vtkAbstractTransform *transform)
virtual vtkAbstractTransform *	GetTransform ()
virtual void	SetComments (const char *)
virtual char *	GetComments ()
Public Member Functions inherited from vtkAlgorithm
vtkAlgorithm *	NewInstance () const
int	HasExecutive ()
vtkExecutive *	GetExecutive ()
virtual void	SetExecutive (vtkExecutive *executive)
virtual int	ModifyRequest (vtkInformation *request, int when)
vtkInformation *	GetInputPortInformation (int port)
vtkInformation *	GetOutputPortInformation (int port)
int	GetNumberOfInputPorts ()
int	GetNumberOfOutputPorts ()
void	UpdateProgress (double amount)
vtkInformation *	GetInputArrayInformation (int idx)
void	RemoveAllInputs ()
vtkDataObject *	GetOutputDataObject (int port)
virtual void	RemoveInputConnection (int port, vtkAlgorithmOutput *input)
virtual void	RemoveInputConnection (int port, int idx)
virtual void	RemoveAllInputConnections (int port)
int	GetNumberOfInputConnections (int port)
int	GetTotalNumberOfInputConnections ()
vtkAlgorithmOutput *	GetInputConnection (int port, int index)
vtkAlgorithm *	GetInputAlgorithm (int port, int index, int &algPort)
vtkAlgorithm *	GetInputAlgorithm (int port, int index)
vtkExecutive *	GetInputExecutive (int port, int index)
vtkInformation *	GetInputInformation (int port, int index)
vtkInformation *	GetOutputInformation (int port)
virtual void	UpdateInformation ()
virtual void	UpdateDataObject ()
virtual void	PropagateUpdateExtent ()
virtual void	UpdateWholeExtent ()
void	ConvertTotalInputToPortConnection (int ind, int &port, int &conn)
int	SetUpdateExtentToWholeExtent (int port)
int	SetUpdateExtentToWholeExtent ()
void	SetUpdateExtent (int port, int extent[6])
int	ProcessRequest (vtkInformation *request, vtkCollection *inInfo, vtkInformationVector *outInfo)
virtual int	ComputePipelineMTime (vtkInformation *request, vtkInformationVector **inInfoVec, vtkInformationVector *outInfoVec, int requestFromOutputPort, unsigned long *mtime)
virtual vtkInformation *	GetInformation ()
virtual void	SetInformation (vtkInformation *)
virtual void	Register (vtkObjectBase *o)
virtual void	UnRegister (vtkObjectBase *o)
virtual void	SetAbortExecute (int)
virtual int	GetAbortExecute ()
virtual void	AbortExecuteOn ()
virtual void	AbortExecuteOff ()
virtual void	SetProgress (double)
virtual double	GetProgress ()
void	SetProgressText (const char *ptext)
virtual char *	GetProgressText ()
virtual unsigned long	GetErrorCode ()
virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, const char *name)
virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, int fieldAttributeType)
virtual void	SetInputArrayToProcess (int idx, vtkInformation *info)
virtual void	SetInputArrayToProcess (int idx, int port, int connection, const char *fieldAssociation, const char *attributeTypeorName)
vtkDataObject *	GetInputDataObject (int port, int connection)
virtual void	SetInputConnection (int port, vtkAlgorithmOutput *input)
virtual void	SetInputConnection (vtkAlgorithmOutput *input)
virtual void	AddInputConnection (int port, vtkAlgorithmOutput *input)
virtual void	AddInputConnection (vtkAlgorithmOutput *input)
virtual void	SetInputDataObject (int port, vtkDataObject *data)
virtual void	SetInputDataObject (vtkDataObject *data)
virtual void	AddInputDataObject (int port, vtkDataObject *data)
virtual void	AddInputDataObject (vtkDataObject *data)
vtkAlgorithmOutput *	GetOutputPort (int index)
vtkAlgorithmOutput *	GetOutputPort ()
vtkAlgorithm *	GetInputAlgorithm ()
vtkExecutive *	GetInputExecutive ()
vtkInformation *	GetInputInformation ()
virtual void	Update (int port)
virtual void	Update ()
virtual void	SetReleaseDataFlag (int)
virtual int	GetReleaseDataFlag ()
void	ReleaseDataFlagOn ()
void	ReleaseDataFlagOff ()
int	UpdateExtentIsEmpty (vtkInformation *pinfo, vtkDataObject *output)
int	UpdateExtentIsEmpty (vtkInformation *pinfo, int extentType)
void	SetUpdateExtent (int port, int piece, int numPieces, int ghostLevel)
void	SetUpdateExtent (int piece, int numPieces, int ghostLevel)
void	SetUpdateExtent (int extent[6])
int *	GetUpdateExtent ()
int *	GetUpdateExtent (int port)
void	GetUpdateExtent (int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
void	GetUpdateExtent (int port, int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
void	GetUpdateExtent (int extent[6])
void	GetUpdateExtent (int port, int extent[6])
int	GetUpdatePiece ()
int	GetUpdatePiece (int port)
int	GetUpdateNumberOfPieces ()
int	GetUpdateNumberOfPieces (int port)
int	GetUpdateGhostLevel ()
int	GetUpdateGhostLevel (int port)
void	SetProgressObserver (vtkProgressObserver *)
virtual vtkProgressObserver *	GetProgressObserver ()
Public Member Functions inherited from vtkObject
vtkObject *	NewInstance () const
virtual void	DebugOn ()
virtual void	DebugOff ()
bool	GetDebug ()
void	SetDebug (bool debugFlag)
virtual void	Modified ()
virtual unsigned long	GetMTime ()
unsigned long	AddObserver (unsigned long event, vtkCommand *, float priority=0.0f)
unsigned long	AddObserver (const char *event, vtkCommand *, float priority=0.0f)
vtkCommand *	GetCommand (unsigned long tag)
void	RemoveObserver (vtkCommand *)
void	RemoveObservers (unsigned long event, vtkCommand *)
void	RemoveObservers (const char *event, vtkCommand *)
int	HasObserver (unsigned long event, vtkCommand *)
int	HasObserver (const char *event, vtkCommand *)
void	RemoveObserver (unsigned long tag)
void	RemoveObservers (unsigned long event)
void	RemoveObservers (const char *event)
void	RemoveAllObservers ()
int	HasObserver (unsigned long event)
int	HasObserver (const char *event)
template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, void(T::*callback)(), float priority=0.0f)
template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, void(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, bool(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
int	InvokeEvent (unsigned long event, void *callData)
int	InvokeEvent (const char *event, void *callData)
int	InvokeEvent (unsigned long event)
int	InvokeEvent (const char *event)
Public Member Functions inherited from vtkObjectBase
const char *	GetClassName () const
virtual void	Delete ()
virtual void	FastDelete ()
void	Print (ostream &os)
void	SetReferenceCount (int)
void	PrintRevisions (ostream &)
virtual void	PrintHeader (ostream &os, vtkIndent indent)
virtual void	PrintTrailer (ostream &os, vtkIndent indent)
int	GetReferenceCount ()

Static Public Member Functions
static int	IsTypeOf (const char *type)
static vtkMNITransformWriter *	SafeDownCast (vtkObjectBase *o)
static vtkMNITransformWriter *	New ()
Static Public Member Functions inherited from vtkAlgorithm
static vtkAlgorithm *	New ()
static int	IsTypeOf (const char *type)
static vtkAlgorithm *	SafeDownCast (vtkObjectBase *o)
static vtkInformationIntegerKey *	INPUT_IS_OPTIONAL ()
static vtkInformationIntegerKey *	INPUT_IS_REPEATABLE ()
static vtkInformationInformationVectorKey *	INPUT_REQUIRED_FIELDS ()
static vtkInformationStringVectorKey *	INPUT_REQUIRED_DATA_TYPE ()
static vtkInformationInformationVectorKey *	INPUT_ARRAYS_TO_PROCESS ()
static vtkInformationIntegerKey *	INPUT_PORT ()
static vtkInformationIntegerKey *	INPUT_CONNECTION ()
static vtkInformationIntegerKey *	CAN_PRODUCE_SUB_EXTENT ()
static vtkInformationIntegerKey *	CAN_HANDLE_PIECE_REQUEST ()
static void	SetDefaultExecutivePrototype (vtkExecutive *proto)
Static Public Member Functions inherited from vtkObject
static int	IsTypeOf (const char *type)
static vtkObject *	SafeDownCast (vtkObjectBase *o)
static vtkObject *	New ()
static void	BreakOnError ()
static void	SetGlobalWarningDisplay (int val)
static void	GlobalWarningDisplayOn ()
static void	GlobalWarningDisplayOff ()
static int	GetGlobalWarningDisplay ()
Static Public Member Functions inherited from vtkObjectBase
static int	IsTypeOf (const char *name)
static vtkObjectBase *	New ()

Protected Member Functions
virtual vtkObjectBase *	NewInstanceInternal () const
	vtkMNITransformWriter ()
	~vtkMNITransformWriter ()
int	WriteLinearTransform (ostream &outfile, vtkHomogeneousTransform *transform)
int	WriteThinPlateSplineTransform (ostream &outfile, vtkThinPlateSplineTransform *transform)
int	WriteGridTransform (ostream &outfile, vtkGridTransform *transform)
virtual int	WriteTransform (ostream &outfile, vtkAbstractTransform *transform)
virtual int	WriteFile ()
virtual int	ProcessRequest (vtkInformation *request, vtkInformationVector **inInfo, vtkInformationVector *outInfo)
Protected Member Functions inherited from vtkAlgorithm
	vtkAlgorithm ()
	~vtkAlgorithm ()
virtual int	FillInputPortInformation (int port, vtkInformation *info)
virtual int	FillOutputPortInformation (int port, vtkInformation *info)
virtual void	SetNumberOfInputPorts (int n)
virtual void	SetNumberOfOutputPorts (int n)
int	InputPortIndexInRange (int index, const char *action)
int	OutputPortIndexInRange (int index, const char *action)
int	GetInputArrayAssociation (int idx, vtkInformationVector **inputVector)
virtual vtkExecutive *	CreateDefaultExecutive ()
virtual void	ReportReferences (vtkGarbageCollector *)
virtual void	SetNumberOfInputConnections (int port, int n)
int	GetInputArrayAssociation (int idx, int connection, vtkInformationVector **inputVector)
int	GetInputArrayAssociation (int idx, vtkDataObject *input)
vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector)
vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input)
vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input, int &association)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input, int &association)
vtkInformation *	GetInputArrayFieldInformation (int idx, vtkInformationVector **inputVector)
virtual void	SetNthInputConnection (int port, int index, vtkAlgorithmOutput *input)
void	SetInputDataInternal (int port, vtkDataObject *input)
void	AddInputDataInternal (int port, vtkDataObject *input)
virtual void	SetErrorCode (unsigned long)
Protected Member Functions inherited from vtkObject
	vtkObject ()
virtual	~vtkObject ()
virtual void	RegisterInternal (vtkObjectBase *, int check)
virtual void	UnRegisterInternal (vtkObjectBase *, int check)
void	InternalGrabFocus (vtkCommand *mouseEvents, vtkCommand *keypressEvents=NULL)
void	InternalReleaseFocus ()
Protected Member Functions inherited from vtkObjectBase
	vtkObjectBase ()
virtual	~vtkObjectBase ()
virtual void	CollectRevisions (ostream &)
	vtkObjectBase (const vtkObjectBase &)
void	operator= (const vtkObjectBase &)

Protected Attributes
char *	FileName
vtkAbstractTransform *	Transform
vtkCollection *	Transforms
char *	Comments
Protected Attributes inherited from vtkAlgorithm
vtkInformation *	Information
double	Progress
char *	ProgressText
vtkProgressObserver *	ProgressObserver
unsigned long	ErrorCode
Protected Attributes inherited from vtkObject
bool	Debug
vtkTimeStamp	MTime
vtkSubjectHelper *	SubjectHelper
Protected Attributes inherited from vtkObjectBase
vtkAtomicInt32	ReferenceCount
vtkWeakPointerBase **	WeakPointers

Additional Inherited Members
Public Attributes inherited from vtkAlgorithm
int	AbortExecute
Static Protected Member Functions inherited from vtkAlgorithm
static vtkInformationIntegerKey *	PORT_REQUIREMENTS_FILLED ()
Static Protected Attributes inherited from vtkAlgorithm
static vtkExecutive *	DefaultExecutivePrototype

Detailed Description

A writer for MNI transformation files.

The MNI .xfm file format is used to store geometrical transformations. Three kinds of transformations are supported by the file format: affine, thin-plate spline, and grid transformations. This file format was developed at the McConnell Brain Imaging Centre at the Montreal Neurological Institute and is used by their software.

See also

vtkMINCImageWriter vtkMNITransformReader

Thanks:

Thanks to David Gobbi for writing this class and Atamai Inc. for contributing it to VTK.

Tests:

vtkMNITransformWriter (Tests)

Definition at line 78 of file vtkMNITransformWriter.h.

Member Typedef Documentation

typedef vtkAlgorithm vtkMNITransformWriter::Superclass

Definition at line 81 of file vtkMNITransformWriter.h.

Constructor & Destructor Documentation

vtkMNITransformWriter::vtkMNITransformWriter ( )

protected

vtkMNITransformWriter::~vtkMNITransformWriter ( )

protected

Member Function Documentation

static int vtkMNITransformWriter::IsTypeOf ( const char *  type )

static

virtual int vtkMNITransformWriter::IsA ( const char *  name )

virtual

Return 1 if this class is the same type of (or a subclass of) the named class. Returns 0 otherwise. This method works in combination with vtkTypeMacro found in vtkSetGet.h.

Reimplemented from vtkAlgorithm.

static vtkMNITransformWriter* vtkMNITransformWriter::SafeDownCast ( vtkObjectBase *  o )

static

virtual vtkObjectBase* vtkMNITransformWriter::NewInstanceInternal ( ) const

protectedvirtual

Reimplemented from vtkAlgorithm.

vtkMNITransformWriter* vtkMNITransformWriter::NewInstance

(

)

const

static vtkMNITransformWriter* vtkMNITransformWriter::New ( )

static

virtual void vtkMNITransformWriter::PrintSelf ( ostream &  os, vtkIndent  indent  )

virtual

Methods invoked by print to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from vtkAlgorithm.

virtual void vtkMNITransformWriter::SetFileName ( const char *  )

virtual

Set the file name.

virtual char* vtkMNITransformWriter::GetFileName ( )

virtual

Set the file name.

virtual const char* vtkMNITransformWriter::GetFileExtensions ( )

inlinevirtual

Get the entension for this file format.

Definition at line 94 of file vtkMNITransformWriter.h.

virtual const char* vtkMNITransformWriter::GetDescriptiveName ( )

inlinevirtual

Get the name of this file format.

Definition at line 100 of file vtkMNITransformWriter.h.

virtual void vtkMNITransformWriter::SetTransform ( vtkAbstractTransform *  transform )

virtual

Set the transform.

virtual vtkAbstractTransform* vtkMNITransformWriter::GetTransform ( )

inlinevirtual

Set the transform.

Definition at line 107 of file vtkMNITransformWriter.h.

virtual void vtkMNITransformWriter::AddTransform ( vtkAbstractTransform *  transform )

virtual

Add another transform to the file. The next time that SetTransform is called, all added transforms will be removed.

virtual int vtkMNITransformWriter::GetNumberOfTransforms ( )

virtual

Get the number of transforms that will be written.

virtual void vtkMNITransformWriter::SetComments ( const char *  )

virtual

Set comments to be added to the file.

virtual char* vtkMNITransformWriter::GetComments ( )

virtual

Set comments to be added to the file.

virtual void vtkMNITransformWriter::Write ( )

virtual

Write the file.

int vtkMNITransformWriter::WriteLinearTransform ( ostream &  outfile, vtkHomogeneousTransform *  transform  )

protected

int vtkMNITransformWriter::WriteThinPlateSplineTransform ( ostream &  outfile, vtkThinPlateSplineTransform *  transform  )

protected

int vtkMNITransformWriter::WriteGridTransform ( ostream &  outfile, vtkGridTransform *  transform  )

protected

virtual int vtkMNITransformWriter::WriteTransform ( ostream &  outfile, vtkAbstractTransform *  transform  )

protectedvirtual

virtual int vtkMNITransformWriter::WriteFile ( )

protectedvirtual

virtual int vtkMNITransformWriter::ProcessRequest ( vtkInformation *  request, vtkInformationVector **  inInfo, vtkInformationVector *  outInfo  )

protectedvirtual

Upstream/Downstream requests form the generalized interface through which executives invoke a algorithm's functionality. Upstream requests correspond to information flow from the algorithm's outputs to its inputs. Downstream requests correspond to information flow from the algorithm's inputs to its outputs. A downstream request is defined by the contents of the request information object. The input to the request is stored in the input information vector passed to ProcessRequest. The results of an downstream request are stored in the output information vector passed to ProcessRequest. An upstream request is defined by the contents of the request information object. The input to the request is stored in the output information vector passed to ProcessRequest. The results of an upstream request are stored in the input information vector passed to ProcessRequest. It returns the boolean status of the pipeline (false means failure).

Reimplemented from vtkAlgorithm.

Member Data Documentation

char* vtkMNITransformWriter::FileName

protected

Definition at line 131 of file vtkMNITransformWriter.h.

vtkAbstractTransform* vtkMNITransformWriter::Transform

protected

Definition at line 132 of file vtkMNITransformWriter.h.

vtkCollection* vtkMNITransformWriter::Transforms

protected

Definition at line 133 of file vtkMNITransformWriter.h.

char* vtkMNITransformWriter::Comments

protected

Definition at line 134 of file vtkMNITransformWriter.h.

---

The documentation for this class was generated from the following file:

• dox/IO/MINC/vtkMNITransformWriter.h