VTK  9.3.20240614
Public Member Functions | Protected Member Functions | Static Protected Member Functions | Protected Attributes | List of all members
vtkNIFTIImageWriter Class Reference

Write NIfTI-1 and NIfTI-2 medical image files. More...

#include <vtkNIFTIImageWriter.h>

Inheritance diagram for vtkNIFTIImageWriter:
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Collaboration diagram for vtkNIFTIImageWriter:
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Public Member Functions

void PrintSelf (ostream &os, vtkIndent indent) override
 Print information about this object.
 
void SetQFormMatrix (vtkMatrix4x4 *)
 Set the "qform" orientation and offset for the image data.
 
vtkMatrix4x4GetQFormMatrix ()
 
void SetSFormMatrix (vtkMatrix4x4 *)
 Set a matrix for the "sform" transformation stored in the file.
 
vtkMatrix4x4GetSFormMatrix ()
 
virtual void SetNIFTIVersion (int)
 Set the version number for the NIfTI file format to use.
 
virtual int GetNIFTIVersion ()
 Set the version number for the NIfTI file format to use.
 
virtual void SetDescription (const char *)
 Set a short description (max 80 chars) of how the file was produced.
 
virtual char * GetDescription ()
 Set a short description (max 80 chars) of how the file was produced.
 
virtual int GetTimeDimension ()
 Set the time dimension to use in the NIFTI file (or zero if none).
 
virtual void SetTimeDimension (int)
 Set the time dimension to use in the NIFTI file (or zero if none).
 
virtual double GetTimeSpacing ()
 Set the time dimension to use in the NIFTI file (or zero if none).
 
virtual void SetTimeSpacing (double)
 Set the time dimension to use in the NIFTI file (or zero if none).
 
virtual void SetRescaleSlope (double)
 Set the slope and intercept for calibrating the scalar values.
 
virtual double GetRescaleSlope ()
 Set the slope and intercept for calibrating the scalar values.
 
virtual void SetRescaleIntercept (double)
 Set the slope and intercept for calibrating the scalar values.
 
virtual double GetRescaleIntercept ()
 Set the slope and intercept for calibrating the scalar values.
 
virtual bool GetPlanarRGB ()
 Write planar RGB (separate R, G, and B planes), rather than packed RGB.
 
virtual void SetPlanarRGB (bool)
 Write planar RGB (separate R, G, and B planes), rather than packed RGB.
 
virtual void PlanarRGBOn ()
 Write planar RGB (separate R, G, and B planes), rather than packed RGB.
 
virtual void PlanarRGBOff ()
 Write planar RGB (separate R, G, and B planes), rather than packed RGB.
 
virtual void SetQFac (double)
 The QFac sets the ordering of the slices in the NIFTI file.
 
virtual double GetQFac ()
 The QFac sets the ordering of the slices in the NIFTI file.
 
void SetNIFTIHeader (vtkNIFTIImageHeader *hdr)
 Set the NIFTI header information to use when writing the file.
 
vtkNIFTIImageHeaderGetNIFTIHeader ()
 Set the NIFTI header information to use when writing the file.
 
- Public Member Functions inherited from vtkImageWriter
virtual vtkTypeBool IsA (const char *type)
 Return 1 if this class is the same type of (or a subclass of) the named class.
 
vtkImageWriterNewInstance () const
 
void PrintSelf (ostream &os, vtkIndent indent) override
 Methods invoked by print to print information about the object including superclasses.
 
vtkImageDataGetInput ()
 Set/Get the input object from the image pipeline.
 
virtual void Write ()
 The main interface which triggers the writer to start.
 
void DeleteFiles ()
 
 vtkSetFilePathMacro (FileName)
 Specify file name for the image file.
 
 vtkGetFilePathMacro (FileName)
 Specify file name for the image file.
 
 vtkSetFilePathMacro (FilePrefix)
 Specify file prefix for the image file(s).You should specify either a FileName or FilePrefix.
 
 vtkGetFilePathMacro (FilePrefix)
 Specify file prefix for the image file(s).You should specify either a FileName or FilePrefix.
 
 vtkSetFilePathMacro (FilePattern)
 The snprintf format used to build filename from FilePrefix and number.
 
 vtkGetFilePathMacro (FilePattern)
 The snprintf format used to build filename from FilePrefix and number.
 
virtual void SetFileDimensionality (int)
 What dimension are the files to be written.
 
virtual int GetFileDimensionality ()
 What dimension are the files to be written.
 
- Public Member Functions inherited from vtkImageAlgorithm
virtual vtkTypeBool IsA (const char *type)
 Return 1 if this class is the same type of (or a subclass of) the named class.
 
vtkImageAlgorithmNewInstance () const
 
void PrintSelf (ostream &os, vtkIndent indent) override
 Methods invoked by print to print information about the object including superclasses.
 
vtkTypeBool ProcessRequest (vtkInformation *, vtkInformationVector **, vtkInformationVector *) override
 Process a request from the executive.
 
vtkImageDataGetOutput ()
 Get the output data object for a port on this algorithm.
 
vtkImageDataGetOutput (int)
 Get the output data object for a port on this algorithm.
 
virtual void SetOutput (vtkDataObject *d)
 Get the output data object for a port on this algorithm.
 
void SetInputData (vtkDataObject *)
 Assign a data object as input.
 
void SetInputData (int, vtkDataObject *)
 Assign a data object as input.
 
vtkDataObjectGetInput (int port)
 Get a data object for one of the input port connections.
 
vtkDataObjectGetInput ()
 Get a data object for one of the input port connections.
 
vtkImageDataGetImageDataInput (int port)
 Get a data object for one of the input port connections.
 
virtual void AddInputData (vtkDataObject *)
 Assign a data object as input.
 
virtual void AddInputData (int, vtkDataObject *)
 Assign a data object as input.
 
- Public Member Functions inherited from vtkAlgorithm
virtual vtkTypeBool IsA (const char *type)
 Return 1 if this class is the same type of (or a subclass of) the named class.
 
vtkAlgorithmNewInstance () const
 
void PrintSelf (ostream &os, vtkIndent indent) override
 Methods invoked by print to print information about the object including superclasses.
 
vtkTypeBool HasExecutive ()
 Check whether this algorithm has an assigned executive.
 
vtkExecutiveGetExecutive ()
 Get this algorithm's executive.
 
virtual void SetExecutive (vtkExecutive *executive)
 Set this algorithm's executive.
 
virtual vtkTypeBool ProcessRequest (vtkInformation *request, vtkInformationVector **inInfo, vtkInformationVector *outInfo)
 Upstream/Downstream requests form the generalized interface through which executives invoke a algorithm's functionality.
 
vtkTypeBool ProcessRequest (vtkInformation *request, vtkCollection *inInfo, vtkInformationVector *outInfo)
 Version of ProcessRequest() that is wrapped.
 
virtual int ComputePipelineMTime (vtkInformation *request, vtkInformationVector **inInfoVec, vtkInformationVector *outInfoVec, int requestFromOutputPort, vtkMTimeType *mtime)
 A special version of ProcessRequest meant specifically for the pipeline modified time request.
 
virtual int ModifyRequest (vtkInformation *request, int when)
 This method gives the algorithm a chance to modify the contents of a request before or after (specified in the when argument) it is forwarded.
 
vtkInformationGetInputPortInformation (int port)
 Get the information object associated with an input port.
 
vtkInformationGetOutputPortInformation (int port)
 Get the information object associated with an output port.
 
int GetNumberOfInputPorts ()
 Get the number of input ports used by the algorithm.
 
int GetNumberOfOutputPorts ()
 Get the number of output ports provided by the algorithm.
 
void SetAbortExecuteAndUpdateTime ()
 Set AbortExecute Flag and update LastAbortTime.
 
void UpdateProgress (double amount)
 Update the progress of the process object.
 
bool CheckAbort ()
 Checks to see if this filter should abort.
 
virtual void SetInputArrayToProcess (int idx, int port, int connection, const char *fieldAssociation, const char *attributeTypeorName)
 String based versions of SetInputArrayToProcess().
 
vtkInformationGetInputArrayInformation (int idx)
 Get the info object for the specified input array to this algorithm.
 
void RemoveAllInputs ()
 Remove all the input data.
 
vtkDataObjectGetOutputDataObject (int port)
 Get the data object that will contain the algorithm output for the given port.
 
vtkDataObjectGetInputDataObject (int port, int connection)
 Get the data object that will contain the algorithm input for the given port and given connection.
 
virtual void RemoveInputConnection (int port, vtkAlgorithmOutput *input)
 Remove a connection from the given input port index.
 
virtual void RemoveInputConnection (int port, int idx)
 Remove a connection given by index idx.
 
virtual void RemoveAllInputConnections (int port)
 Removes all input connections.
 
virtual void SetInputDataObject (int port, vtkDataObject *data)
 Sets the data-object as an input on the given port index.
 
virtual void SetInputDataObject (vtkDataObject *data)
 
virtual void AddInputDataObject (int port, vtkDataObject *data)
 Add the data-object as an input to this given port.
 
virtual void AddInputDataObject (vtkDataObject *data)
 
vtkAlgorithmOutputGetOutputPort (int index)
 Get a proxy object corresponding to the given output port of this algorithm.
 
vtkAlgorithmOutputGetOutputPort ()
 
int GetNumberOfInputConnections (int port)
 Get the number of inputs currently connected to a port.
 
int GetTotalNumberOfInputConnections ()
 Get the total number of inputs for this algorithm.
 
vtkAlgorithmOutputGetInputConnection (int port, int index)
 Get the algorithm output port connected to an input port.
 
vtkAlgorithmGetInputAlgorithm (int port, int index, int &algPort)
 Returns the algorithm and the output port index of that algorithm connected to a port-index pair.
 
vtkAlgorithmGetInputAlgorithm (int port, int index)
 Returns the algorithm connected to a port-index pair.
 
vtkAlgorithmGetInputAlgorithm ()
 Equivalent to GetInputAlgorithm(0, 0).
 
vtkExecutiveGetInputExecutive (int port, int index)
 Returns the executive associated with a particular input connection.
 
vtkExecutiveGetInputExecutive ()
 Equivalent to GetInputExecutive(0, 0)
 
vtkInformationGetInputInformation (int port, int index)
 Return the information object that is associated with a particular input connection.
 
vtkInformationGetInputInformation ()
 Equivalent to GetInputInformation(0, 0)
 
vtkInformationGetOutputInformation (int port)
 Return the information object that is associated with a particular output port.
 
virtual vtkTypeBool Update (int port, vtkInformationVector *requests)
 This method enables the passing of data requests to the algorithm to be used during execution (in addition to bringing a particular port up-to-date).
 
virtual vtkTypeBool Update (vtkInformation *requests)
 Convenience method to update an algorithm after passing requests to its first output port.
 
virtual int UpdatePiece (int piece, int numPieces, int ghostLevels, const int extents[6]=nullptr)
 Convenience method to update an algorithm after passing requests to its first output port.
 
virtual int UpdateExtent (const int extents[6])
 Convenience method to update an algorithm after passing requests to its first output port.
 
virtual int UpdateTimeStep (double time, int piece=-1, int numPieces=1, int ghostLevels=0, const int extents[6]=nullptr)
 Convenience method to update an algorithm after passing requests to its first output port.
 
virtual void UpdateInformation ()
 Bring the algorithm's information up-to-date.
 
virtual void UpdateDataObject ()
 Create output object(s).
 
virtual void PropagateUpdateExtent ()
 Propagate meta-data upstream.
 
virtual void UpdateWholeExtent ()
 Bring this algorithm's outputs up-to-date.
 
void ConvertTotalInputToPortConnection (int ind, int &port, int &conn)
 Convenience routine to convert from a linear ordering of input connections to a port/connection pair.
 
void RemoveNoPriorTemporalAccessInformationKey ()
 Removes any information key vtkStreamingDemandDrivenPipeline::NO_PRIOR_TEMPORAL_ACCESS() to all output ports of this vtkAlgorithm.
 
virtual vtkInformationGetInformation ()
 Set/Get the information object associated with this algorithm.
 
virtual void SetInformation (vtkInformation *)
 Set/Get the information object associated with this algorithm.
 
bool UsesGarbageCollector () const override
 Participate in garbage collection.
 
virtual void SetAbortExecute (vtkTypeBool)
 Set/Get the AbortExecute flag for the process object.
 
virtual vtkTypeBool GetAbortExecute ()
 Set/Get the AbortExecute flag for the process object.
 
virtual void AbortExecuteOn ()
 Set/Get the AbortExecute flag for the process object.
 
virtual void AbortExecuteOff ()
 Set/Get the AbortExecute flag for the process object.
 
virtual double GetProgress ()
 Get the execution progress of a process object.
 
void SetContainerAlgorithm (vtkAlgorithm *containerAlg)
 Set/get a Container algorithm for this algorithm.
 
vtkAlgorithmGetContainerAlgorithm ()
 Set/get a Container algorithm for this algorithm.
 
virtual void SetAbortOutput (bool)
 Set/Get an internal variable used to communicate between the algorithm and executive.
 
virtual bool GetAbortOutput ()
 Set/Get an internal variable used to communicate between the algorithm and executive.
 
void SetProgressShiftScale (double shift, double scale)
 Specify the shift and scale values to use to apply to the progress amount when UpdateProgress is called.
 
virtual double GetProgressShift ()
 Specify the shift and scale values to use to apply to the progress amount when UpdateProgress is called.
 
virtual double GetProgressScale ()
 Specify the shift and scale values to use to apply to the progress amount when UpdateProgress is called.
 
void SetProgressText (const char *ptext)
 Set the current text message associated with the progress state.
 
virtual char * GetProgressText ()
 Set the current text message associated with the progress state.
 
virtual unsigned long GetErrorCode ()
 The error code contains a possible error that occurred while reading or writing the file.
 
virtual void SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, const char *name)
 Set the input data arrays that this algorithm will process.
 
virtual void SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, int fieldAttributeType)
 Set the input data arrays that this algorithm will process.
 
virtual void SetInputArrayToProcess (int idx, vtkInformation *info)
 Set the input data arrays that this algorithm will process.
 
virtual void SetInputConnection (int port, vtkAlgorithmOutput *input)
 Set the connection for the given input port index.
 
virtual void SetInputConnection (vtkAlgorithmOutput *input)
 Set the connection for the given input port index.
 
virtual void AddInputConnection (int port, vtkAlgorithmOutput *input)
 Add a connection to the given input port index.
 
virtual void AddInputConnection (vtkAlgorithmOutput *input)
 Add a connection to the given input port index.
 
virtual void Update (int port)
 Bring this algorithm's outputs up-to-date.
 
virtual void Update ()
 Bring this algorithm's outputs up-to-date.
 
virtual void SetReleaseDataFlag (vtkTypeBool)
 Turn release data flag on or off for all output ports.
 
virtual vtkTypeBool GetReleaseDataFlag ()
 Turn release data flag on or off for all output ports.
 
void ReleaseDataFlagOn ()
 Turn release data flag on or off for all output ports.
 
void ReleaseDataFlagOff ()
 Turn release data flag on or off for all output ports.
 
int UpdateExtentIsEmpty (vtkInformation *pinfo, vtkDataObject *output)
 This detects when the UpdateExtent will generate no data This condition is satisfied when the UpdateExtent has zero volume (0,-1,...) or the UpdateNumberOfPieces is 0.
 
int UpdateExtentIsEmpty (vtkInformation *pinfo, int extentType)
 This detects when the UpdateExtent will generate no data This condition is satisfied when the UpdateExtent has zero volume (0,-1,...) or the UpdateNumberOfPieces is 0.
 
int * GetUpdateExtent ()
 These functions return the update extent for output ports that use 3D extents.
 
int * GetUpdateExtent (int port)
 These functions return the update extent for output ports that use 3D extents.
 
void GetUpdateExtent (int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
 These functions return the update extent for output ports that use 3D extents.
 
void GetUpdateExtent (int port, int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
 These functions return the update extent for output ports that use 3D extents.
 
void GetUpdateExtent (int extent[6])
 These functions return the update extent for output ports that use 3D extents.
 
void GetUpdateExtent (int port, int extent[6])
 These functions return the update extent for output ports that use 3D extents.
 
int GetUpdatePiece ()
 These functions return the update extent for output ports that use piece extents.
 
int GetUpdatePiece (int port)
 These functions return the update extent for output ports that use piece extents.
 
int GetUpdateNumberOfPieces ()
 These functions return the update extent for output ports that use piece extents.
 
int GetUpdateNumberOfPieces (int port)
 These functions return the update extent for output ports that use piece extents.
 
int GetUpdateGhostLevel ()
 These functions return the update extent for output ports that use piece extents.
 
int GetUpdateGhostLevel (int port)
 These functions return the update extent for output ports that use piece extents.
 
void SetProgressObserver (vtkProgressObserver *)
 If an ProgressObserver is set, the algorithm will report progress through it rather than directly.
 
virtual vtkProgressObserverGetProgressObserver ()
 If an ProgressObserver is set, the algorithm will report progress through it rather than directly.
 
void SetNoPriorTemporalAccessInformationKey (int key)
 Set to all output ports of this algorithm the information key vtkStreamingDemandDrivenPipeline::NO_PRIOR_TEMPORAL_ACCESS().
 
void SetNoPriorTemporalAccessInformationKey ()
 Set to all output ports of this algorithm the information key vtkStreamingDemandDrivenPipeline::NO_PRIOR_TEMPORAL_ACCESS().
 
- Public Member Functions inherited from vtkObject
 vtkBaseTypeMacro (vtkObject, vtkObjectBase)
 
virtual void DebugOn ()
 Turn debugging output on.
 
virtual void DebugOff ()
 Turn debugging output off.
 
bool GetDebug ()
 Get the value of the debug flag.
 
void SetDebug (bool debugFlag)
 Set the value of the debug flag.
 
virtual void Modified ()
 Update the modification time for this object.
 
virtual vtkMTimeType GetMTime ()
 Return this object's modified time.
 
void PrintSelf (ostream &os, vtkIndent indent) override
 Methods invoked by print to print information about the object including superclasses.
 
void RemoveObserver (unsigned long tag)
 
void RemoveObservers (unsigned long event)
 
void RemoveObservers (const char *event)
 
void RemoveAllObservers ()
 
vtkTypeBool HasObserver (unsigned long event)
 
vtkTypeBool HasObserver (const char *event)
 
vtkTypeBool InvokeEvent (unsigned long event)
 
vtkTypeBool InvokeEvent (const char *event)
 
std::string GetObjectDescription () const override
 The object description printed in messages and PrintSelf output.
 
unsigned long AddObserver (unsigned long event, vtkCommand *, float priority=0.0f)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object.
 
unsigned long AddObserver (const char *event, vtkCommand *, float priority=0.0f)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object.
 
vtkCommandGetCommand (unsigned long tag)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object.
 
void RemoveObserver (vtkCommand *)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object.
 
void RemoveObservers (unsigned long event, vtkCommand *)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object.
 
void RemoveObservers (const char *event, vtkCommand *)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object.
 
vtkTypeBool HasObserver (unsigned long event, vtkCommand *)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object.
 
vtkTypeBool HasObserver (const char *event, vtkCommand *)
 Allow people to add/remove/invoke observers (callbacks) to any VTK object.
 
template<class U , class T >
unsigned long AddObserver (unsigned long event, U observer, void(T::*callback)(), float priority=0.0f)
 Overloads to AddObserver that allow developers to add class member functions as callbacks for events.
 
template<class U , class T >
unsigned long AddObserver (unsigned long event, U observer, void(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
 Overloads to AddObserver that allow developers to add class member functions as callbacks for events.
 
template<class U , class T >
unsigned long AddObserver (unsigned long event, U observer, bool(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
 Allow user to set the AbortFlagOn() with the return value of the callback method.
 
vtkTypeBool InvokeEvent (unsigned long event, void *callData)
 This method invokes an event and return whether the event was aborted or not.
 
vtkTypeBool InvokeEvent (const char *event, void *callData)
 This method invokes an event and return whether the event was aborted or not.
 
virtual void SetObjectName (const std::string &objectName)
 Set/get the name of this object for reporting purposes.
 
virtual std::string GetObjectName () const
 Set/get the name of this object for reporting purposes.
 
- Public Member Functions inherited from vtkObjectBase
const char * GetClassName () const
 Return the class name as a string.
 
virtual std::string GetObjectDescription () const
 The object description printed in messages and PrintSelf output.
 
virtual vtkTypeBool IsA (const char *name)
 Return 1 if this class is the same type of (or a subclass of) the named class.
 
virtual vtkIdType GetNumberOfGenerationsFromBase (const char *name)
 Given the name of a base class of this class type, return the distance of inheritance between this class type and the named class (how many generations of inheritance are there between this class and the named class).
 
virtual void Delete ()
 Delete a VTK object.
 
virtual void FastDelete ()
 Delete a reference to this object.
 
void InitializeObjectBase ()
 
void Print (ostream &os)
 Print an object to an ostream.
 
void Register (vtkObjectBase *o)
 Increase the reference count (mark as used by another object).
 
virtual void UnRegister (vtkObjectBase *o)
 Decrease the reference count (release by another object).
 
int GetReferenceCount ()
 Return the current reference count of this object.
 
void SetReferenceCount (int)
 Sets the reference count.
 
bool GetIsInMemkind () const
 A local state flag that remembers whether this object lives in the normal or extended memory space.
 
virtual void PrintHeader (ostream &os, vtkIndent indent)
 Methods invoked by print to print information about the object including superclasses.
 
virtual void PrintTrailer (ostream &os, vtkIndent indent)
 Methods invoked by print to print information about the object including superclasses.
 

Protected Member Functions

 vtkNIFTIImageWriter ()
 
 ~vtkNIFTIImageWriter () override
 
int GenerateHeader (vtkInformation *info, bool singleFile)
 Generate the header information for the file.
 
int RequestData (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector) override
 The main execution method, which writes the file.
 
- Protected Member Functions inherited from vtkImageWriter
virtual vtkObjectBaseNewInstanceInternal () const
 
 vtkImageWriter ()
 
 ~vtkImageWriter () override
 
virtual void RecursiveWrite (int dim, vtkImageData *region, vtkInformation *inInfo, ostream *file)
 
virtual void RecursiveWrite (int dim, vtkImageData *cache, vtkImageData *data, vtkInformation *inInfo, ostream *file)
 
virtual void WriteFile (ostream *file, vtkImageData *data, int extent[6], int wExtent[6])
 
virtual void WriteFileHeader (ostream *, vtkImageData *, int[6])
 
virtual void WriteFileTrailer (ostream *, vtkImageData *)
 
virtual void MemoryWrite (int, vtkImageData *, int[6], vtkInformation *)
 
int RequestData (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector) override
 This is called in response to a REQUEST_DATA request from the executive.
 
- Protected Member Functions inherited from vtkImageAlgorithm
virtual vtkObjectBaseNewInstanceInternal () const
 
 vtkImageAlgorithm ()
 
 ~vtkImageAlgorithm () override
 
virtual int RequestInformation (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector)
 Subclasses can reimplement this method to collect information from their inputs and set information for their outputs.
 
virtual int RequestUpdateExtent (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
 Subclasses can reimplement this method to translate the update extent requests from each output port into update extent requests for the input connections.
 
virtual int RequestUpdateTime (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
 
virtual void CopyInputArrayAttributesToOutput (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector)
 Convenience method to copy the scalar type and number of components from the input data to the output data.
 
virtual int RequestData (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector)
 This is called in response to a REQUEST_DATA request from the executive.
 
virtual void ExecuteDataWithInformation (vtkDataObject *output, vtkInformation *outInfo)
 This is a convenience method that is implemented in many subclasses instead of RequestData.
 
virtual void CopyAttributeData (vtkImageData *in, vtkImageData *out, vtkInformationVector **inputVector)
 Copy the other point and cell data.
 
virtual void ExecuteData (vtkDataObject *output)
 This method is the old style execute method, provided for the sake of backwards compatibility with older filters and readers.
 
virtual void Execute ()
 This method is the old style execute method, provided for the sake of backwards compatibility with older filters and readers.
 
virtual void AllocateOutputData (vtkImageData *out, vtkInformation *outInfo, int *uExtent)
 Allocate the output data.
 
virtual vtkImageDataAllocateOutputData (vtkDataObject *out, vtkInformation *outInfo)
 Allocate the output data.
 
int FillOutputPortInformation (int port, vtkInformation *info) override
 These method should be reimplemented by subclasses that have more than a single input or single output.
 
int FillInputPortInformation (int port, vtkInformation *info) override
 These method should be reimplemented by subclasses that have more than a single input or single output.
 
- Protected Member Functions inherited from vtkAlgorithm
virtual vtkObjectBaseNewInstanceInternal () const
 
 vtkAlgorithm ()
 
 ~vtkAlgorithm () override
 
bool CheckUpstreamAbort ()
 Checks to see if an upstream filter has been aborted.
 
virtual int FillInputPortInformation (int port, vtkInformation *info)
 Fill the input port information objects for this algorithm.
 
virtual int FillOutputPortInformation (int port, vtkInformation *info)
 Fill the output port information objects for this algorithm.
 
virtual void SetNumberOfInputPorts (int n)
 Set the number of input ports used by the algorithm.
 
virtual void SetNumberOfOutputPorts (int n)
 Set the number of output ports provided by the algorithm.
 
int InputPortIndexInRange (int index, const char *action)
 
int OutputPortIndexInRange (int index, const char *action)
 
int GetInputArrayAssociation (int idx, vtkInformationVector **inputVector)
 Get the association of the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass.
 
vtkInformationGetInputArrayFieldInformation (int idx, vtkInformationVector **inputVector)
 This method takes in an index (as specified in SetInputArrayToProcess) and a pipeline information vector.
 
virtual vtkExecutiveCreateDefaultExecutive ()
 Create a default executive.
 
void ReportReferences (vtkGarbageCollector *) override
 
virtual void SetNthInputConnection (int port, int index, vtkAlgorithmOutput *input)
 Replace the Nth connection on the given input port.
 
virtual void SetNumberOfInputConnections (int port, int n)
 Set the number of input connections on the given input port.
 
void SetInputDataInternal (int port, vtkDataObject *input)
 These methods are used by subclasses to implement methods to set data objects directly as input.
 
void AddInputDataInternal (int port, vtkDataObject *input)
 
int GetInputArrayAssociation (int idx, int connection, vtkInformationVector **inputVector)
 Filters that have multiple connections on one port can use this signature.
 
int GetInputArrayAssociation (int idx, vtkDataObject *input)
 Filters that have multiple connections on one port can use this signature.
 
vtkDataArrayGetInputArrayToProcess (int idx, vtkInformationVector **inputVector)
 Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass.
 
vtkDataArrayGetInputArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
 Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass.
 
vtkDataArrayGetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
 Filters that have multiple connections on one port can use this signature.
 
vtkDataArrayGetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
 Filters that have multiple connections on one port can use this signature.
 
vtkDataArrayGetInputArrayToProcess (int idx, vtkDataObject *input)
 Filters that have multiple connections on one port can use this signature.
 
vtkDataArrayGetInputArrayToProcess (int idx, vtkDataObject *input, int &association)
 Filters that have multiple connections on one port can use this signature.
 
vtkAbstractArrayGetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector)
 Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass.
 
vtkAbstractArrayGetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
 Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass.
 
vtkAbstractArrayGetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
 Filters that have multiple connections on one port can use this signature.
 
vtkAbstractArrayGetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
 Filters that have multiple connections on one port can use this signature.
 
vtkAbstractArrayGetInputAbstractArrayToProcess (int idx, vtkDataObject *input)
 Filters that have multiple connections on one port can use this signature.
 
vtkAbstractArrayGetInputAbstractArrayToProcess (int idx, vtkDataObject *input, int &association)
 Filters that have multiple connections on one port can use this signature.
 
virtual void SetErrorCode (unsigned long)
 The error code contains a possible error that occurred while reading or writing the file.
 
- Protected Member Functions inherited from vtkObject
 vtkObject ()
 
 ~vtkObject () override
 
void RegisterInternal (vtkObjectBase *, vtkTypeBool check) override
 
void UnRegisterInternal (vtkObjectBase *, vtkTypeBool check) override
 
void InternalGrabFocus (vtkCommand *mouseEvents, vtkCommand *keypressEvents=nullptr)
 These methods allow a command to exclusively grab all events.
 
void InternalReleaseFocus ()
 These methods allow a command to exclusively grab all events.
 
- Protected Member Functions inherited from vtkObjectBase
 vtkObjectBase ()
 
virtual ~vtkObjectBase ()
 
virtual void RegisterInternal (vtkObjectBase *, vtkTypeBool check)
 
virtual void UnRegisterInternal (vtkObjectBase *, vtkTypeBool check)
 
virtual void ReportReferences (vtkGarbageCollector *)
 
virtual void ObjectFinalize ()
 
 vtkObjectBase (const vtkObjectBase &)
 
void operator= (const vtkObjectBase &)
 

Static Protected Member Functions

static char * ReplaceExtension (const char *filename, const char *ext1, const char *ext2)
 Make a new filename by replacing extension "ext1" with "ext2".
 
- Static Protected Member Functions inherited from vtkAlgorithm
static vtkInformationIntegerKeyPORT_REQUIREMENTS_FILLED ()
 
- Static Protected Member Functions inherited from vtkObjectBase
static vtkMallocingFunction GetCurrentMallocFunction ()
 
static vtkReallocingFunction GetCurrentReallocFunction ()
 
static vtkFreeingFunction GetCurrentFreeFunction ()
 
static vtkFreeingFunction GetAlternateFreeFunction ()
 

Protected Attributes

double QFac
 Is -1 if VTK slice order is opposite to NIFTI slice order, +1 otherwise.
 
char * Description
 A description of how the file was produced.
 
bool PlanarRGB
 Use planar RGB instead of the default (packed).
 
int TimeDimension
 The size and spacing of the Time dimension to use in the file.
 
double TimeSpacing
 The size and spacing of the Time dimension to use in the file.
 
double RescaleIntercept
 Information for rescaling data to quantitative units.
 
double RescaleSlope
 Information for rescaling data to quantitative units.
 
vtkMatrix4x4QFormMatrix
 The orientation matrices for the NIFTI file.
 
vtkMatrix4x4SFormMatrix
 The orientation matrices for the NIFTI file.
 
vtkNIFTIImageHeaderNIFTIHeader
 The header information.
 
vtkNIFTIImageHeaderOwnHeader
 The header information.
 
int NIFTIVersion
 The header information.
 
- Protected Attributes inherited from vtkImageWriter
int FileDimensionality
 
char * FilePrefix
 
char * FilePattern
 
char * FileName
 
int FileNumber
 
int FileLowerLeft
 
char * InternalFileName
 
size_t InternalFileNameSize
 
vtkTypeUBool WriteToMemory
 
int MinimumFileNumber
 
int MaximumFileNumber
 
int FilesDeleted
 
- Protected Attributes inherited from vtkAlgorithm
vtkTimeStamp LastAbortCheckTime
 
vtkInformationInformation
 
double Progress
 
char * ProgressText
 
vtkProgressObserverProgressObserver
 
unsigned long ErrorCode
 The error code contains a possible error that occurred while reading or writing the file.
 
- Protected Attributes inherited from vtkObject
bool Debug
 
vtkTimeStamp MTime
 
vtkSubjectHelper * SubjectHelper
 
std::string ObjectName
 
- Protected Attributes inherited from vtkObjectBase
std::atomic< int32_t > ReferenceCount
 
vtkWeakPointerBase ** WeakPointers
 
typedef vtkImageWriter Superclass
 Static method for construction.
 
static vtkNIFTIImageWriterNew ()
 Static method for construction.
 
static vtkTypeBool IsTypeOf (const char *type)
 Static method for construction.
 
static vtkNIFTIImageWriterSafeDownCast (vtkObjectBase *o)
 Static method for construction.
 
virtual vtkTypeBool IsA (const char *type)
 Static method for construction.
 
vtkNIFTIImageWriterNewInstance () const
 Static method for construction.
 
virtual vtkObjectBaseNewInstanceInternal () const
 Static method for construction.
 

Additional Inherited Members

- Public Types inherited from vtkImageWriter
typedef vtkImageAlgorithm Superclass
 
- Public Types inherited from vtkImageAlgorithm
typedef vtkAlgorithm Superclass
 
- Public Types inherited from vtkAlgorithm
enum  DesiredOutputPrecision { SINGLE_PRECISION , DOUBLE_PRECISION , DEFAULT_PRECISION }
 Values used for setting the desired output precision for various algorithms. More...
 
typedef vtkObject Superclass
 
- Static Public Member Functions inherited from vtkImageWriter
static vtkImageWriterNew ()
 
static vtkTypeBool IsTypeOf (const char *type)
 
static vtkImageWriterSafeDownCast (vtkObjectBase *o)
 
- Static Public Member Functions inherited from vtkImageAlgorithm
static vtkTypeBool IsTypeOf (const char *type)
 
static vtkImageAlgorithmSafeDownCast (vtkObjectBase *o)
 
- Static Public Member Functions inherited from vtkAlgorithm
static vtkAlgorithmNew ()
 
static vtkTypeBool IsTypeOf (const char *type)
 
static vtkAlgorithmSafeDownCast (vtkObjectBase *o)
 
static vtkInformationIntegerKeyINPUT_IS_OPTIONAL ()
 Keys used to specify input port requirements.
 
static vtkInformationIntegerKeyINPUT_IS_REPEATABLE ()
 
static vtkInformationInformationVectorKeyINPUT_REQUIRED_FIELDS ()
 
static vtkInformationStringVectorKeyINPUT_REQUIRED_DATA_TYPE ()
 
static vtkInformationInformationVectorKeyINPUT_ARRAYS_TO_PROCESS ()
 
static vtkInformationIntegerKeyINPUT_PORT ()
 
static vtkInformationIntegerKeyINPUT_CONNECTION ()
 
static vtkInformationIntegerKeyCAN_PRODUCE_SUB_EXTENT ()
 This key tells the executive that a particular output port is capable of producing an arbitrary subextent of the whole extent.
 
static vtkInformationIntegerKeyCAN_HANDLE_PIECE_REQUEST ()
 Key that tells the pipeline that a particular algorithm can or cannot handle piece request.
 
static vtkInformationIntegerKeyABORTED ()
 
static void SetDefaultExecutivePrototype (vtkExecutive *proto)
 If the DefaultExecutivePrototype is set, a copy of it is created in CreateDefaultExecutive() using NewInstance().
 
- Static Public Member Functions inherited from vtkObject
static vtkObjectNew ()
 Create an object with Debug turned off, modified time initialized to zero, and reference counting on.
 
static void BreakOnError ()
 This method is called when vtkErrorMacro executes.
 
static void SetGlobalWarningDisplay (vtkTypeBool val)
 This is a global flag that controls whether any debug, warning or error messages are displayed.
 
static void GlobalWarningDisplayOn ()
 This is a global flag that controls whether any debug, warning or error messages are displayed.
 
static void GlobalWarningDisplayOff ()
 This is a global flag that controls whether any debug, warning or error messages are displayed.
 
static vtkTypeBool GetGlobalWarningDisplay ()
 This is a global flag that controls whether any debug, warning or error messages are displayed.
 
- Static Public Member Functions inherited from vtkObjectBase
static vtkTypeBool IsTypeOf (const char *name)
 Return 1 if this class type is the same type of (or a subclass of) the named class.
 
static vtkIdType GetNumberOfGenerationsFromBaseType (const char *name)
 Given a the name of a base class of this class type, return the distance of inheritance between this class type and the named class (how many generations of inheritance are there between this class and the named class).
 
static vtkObjectBaseNew ()
 Create an object with Debug turned off, modified time initialized to zero, and reference counting on.
 
static void SetMemkindDirectory (const char *directoryname)
 The name of a directory, ideally mounted -o dax, to memory map an extended memory space within.
 
static bool GetUsingMemkind ()
 A global state flag that controls whether vtkObjects are constructed in the usual way (the default) or within the extended memory space.
 
- Public Attributes inherited from vtkAlgorithm
std::atomic< vtkTypeBoolAbortExecute
 
- Static Protected Attributes inherited from vtkAlgorithm
static vtkTimeStamp LastAbortTime
 
static vtkExecutiveDefaultExecutivePrototype
 

Detailed Description

Write NIfTI-1 and NIfTI-2 medical image files.

This class writes NIFTI files, either in .nii format or as separate .img and .hdr files. If told to write a file that ends in ".gz", then the writer will automatically compress the file with zlib. Images of type unsigned char that have 3 or 4 scalar components will automatically be written as RGB or RGBA respectively. Images of type float or double that have 2 components will automatically be written as complex values.

Thanks:
This class was contributed to VTK by the Calgary Image Processing and Analysis Centre (CIPAC).
See also
vtkNIFTIImageReader
Tests:
vtkNIFTIImageWriter (Tests)

Definition at line 34 of file vtkNIFTIImageWriter.h.

Member Typedef Documentation

◆ Superclass

Static method for construction.

Definition at line 42 of file vtkNIFTIImageWriter.h.

Constructor & Destructor Documentation

◆ vtkNIFTIImageWriter()

vtkNIFTIImageWriter::vtkNIFTIImageWriter ( )
protected

◆ ~vtkNIFTIImageWriter()

vtkNIFTIImageWriter::~vtkNIFTIImageWriter ( )
overrideprotected

Member Function Documentation

◆ New()

static vtkNIFTIImageWriter * vtkNIFTIImageWriter::New ( )
static

Static method for construction.

◆ IsTypeOf()

static vtkTypeBool vtkNIFTIImageWriter::IsTypeOf ( const char *  type)
static

Static method for construction.

◆ IsA()

virtual vtkTypeBool vtkNIFTIImageWriter::IsA ( const char *  type)
virtual

Static method for construction.

Reimplemented from vtkImageWriter.

◆ SafeDownCast()

static vtkNIFTIImageWriter * vtkNIFTIImageWriter::SafeDownCast ( vtkObjectBase o)
static

Static method for construction.

◆ NewInstanceInternal()

virtual vtkObjectBase * vtkNIFTIImageWriter::NewInstanceInternal ( ) const
protectedvirtual

Static method for construction.

Reimplemented from vtkImageWriter.

◆ NewInstance()

vtkNIFTIImageWriter * vtkNIFTIImageWriter::NewInstance ( ) const

Static method for construction.

◆ PrintSelf()

void vtkNIFTIImageWriter::PrintSelf ( ostream &  os,
vtkIndent  indent 
)
overridevirtual

Print information about this object.

Reimplemented from vtkImageWriter.

◆ SetNIFTIVersion()

virtual void vtkNIFTIImageWriter::SetNIFTIVersion ( int  )
virtual

Set the version number for the NIfTI file format to use.

This can be 1, 2, or 0 (the default). If set to zero, then it will save as NIfTI version 1 unless SetNIFTIHeader() provided header information from a NIfTI version 2 file.

◆ GetNIFTIVersion()

virtual int vtkNIFTIImageWriter::GetNIFTIVersion ( )
virtual

Set the version number for the NIfTI file format to use.

This can be 1, 2, or 0 (the default). If set to zero, then it will save as NIfTI version 1 unless SetNIFTIHeader() provided header information from a NIfTI version 2 file.

◆ SetDescription()

virtual void vtkNIFTIImageWriter::SetDescription ( const char *  )
virtual

Set a short description (max 80 chars) of how the file was produced.

The default description is "VTKX.Y" where X.Y is the VTK version.

◆ GetDescription()

virtual char * vtkNIFTIImageWriter::GetDescription ( )
virtual

Set a short description (max 80 chars) of how the file was produced.

The default description is "VTKX.Y" where X.Y is the VTK version.

◆ GetTimeDimension()

virtual int vtkNIFTIImageWriter::GetTimeDimension ( )
virtual

Set the time dimension to use in the NIFTI file (or zero if none).

The number of components of the input data must be divisible by the time dimension if the time dimension is not set to zero. The vector dimension will be set to the number of components divided by the time dimension.

◆ SetTimeDimension()

virtual void vtkNIFTIImageWriter::SetTimeDimension ( int  )
virtual

Set the time dimension to use in the NIFTI file (or zero if none).

The number of components of the input data must be divisible by the time dimension if the time dimension is not set to zero. The vector dimension will be set to the number of components divided by the time dimension.

◆ GetTimeSpacing()

virtual double vtkNIFTIImageWriter::GetTimeSpacing ( )
virtual

Set the time dimension to use in the NIFTI file (or zero if none).

The number of components of the input data must be divisible by the time dimension if the time dimension is not set to zero. The vector dimension will be set to the number of components divided by the time dimension.

◆ SetTimeSpacing()

virtual void vtkNIFTIImageWriter::SetTimeSpacing ( double  )
virtual

Set the time dimension to use in the NIFTI file (or zero if none).

The number of components of the input data must be divisible by the time dimension if the time dimension is not set to zero. The vector dimension will be set to the number of components divided by the time dimension.

◆ SetRescaleSlope()

virtual void vtkNIFTIImageWriter::SetRescaleSlope ( double  )
virtual

Set the slope and intercept for calibrating the scalar values.

Other programs that read the NIFTI file can use the equation v = u*RescaleSlope + RescaleIntercept to rescale the data to real values. If both the slope and the intercept are zero, then the SclSlope and SclIntercept in the header info provided via SetNIFTIHeader() are used instead.

◆ GetRescaleSlope()

virtual double vtkNIFTIImageWriter::GetRescaleSlope ( )
virtual

Set the slope and intercept for calibrating the scalar values.

Other programs that read the NIFTI file can use the equation v = u*RescaleSlope + RescaleIntercept to rescale the data to real values. If both the slope and the intercept are zero, then the SclSlope and SclIntercept in the header info provided via SetNIFTIHeader() are used instead.

◆ SetRescaleIntercept()

virtual void vtkNIFTIImageWriter::SetRescaleIntercept ( double  )
virtual

Set the slope and intercept for calibrating the scalar values.

Other programs that read the NIFTI file can use the equation v = u*RescaleSlope + RescaleIntercept to rescale the data to real values. If both the slope and the intercept are zero, then the SclSlope and SclIntercept in the header info provided via SetNIFTIHeader() are used instead.

◆ GetRescaleIntercept()

virtual double vtkNIFTIImageWriter::GetRescaleIntercept ( )
virtual

Set the slope and intercept for calibrating the scalar values.

Other programs that read the NIFTI file can use the equation v = u*RescaleSlope + RescaleIntercept to rescale the data to real values. If both the slope and the intercept are zero, then the SclSlope and SclIntercept in the header info provided via SetNIFTIHeader() are used instead.

◆ GetPlanarRGB()

virtual bool vtkNIFTIImageWriter::GetPlanarRGB ( )
virtual

Write planar RGB (separate R, G, and B planes), rather than packed RGB.

Use this option with extreme caution: the NIFTI standard requires RGB pixels to be packed. The Analyze format, however, was used to store both planar RGB and packed RGB depending on the software, without any indication in the header about which convention was being used.

◆ SetPlanarRGB()

virtual void vtkNIFTIImageWriter::SetPlanarRGB ( bool  )
virtual

Write planar RGB (separate R, G, and B planes), rather than packed RGB.

Use this option with extreme caution: the NIFTI standard requires RGB pixels to be packed. The Analyze format, however, was used to store both planar RGB and packed RGB depending on the software, without any indication in the header about which convention was being used.

◆ PlanarRGBOn()

virtual void vtkNIFTIImageWriter::PlanarRGBOn ( )
virtual

Write planar RGB (separate R, G, and B planes), rather than packed RGB.

Use this option with extreme caution: the NIFTI standard requires RGB pixels to be packed. The Analyze format, however, was used to store both planar RGB and packed RGB depending on the software, without any indication in the header about which convention was being used.

◆ PlanarRGBOff()

virtual void vtkNIFTIImageWriter::PlanarRGBOff ( )
virtual

Write planar RGB (separate R, G, and B planes), rather than packed RGB.

Use this option with extreme caution: the NIFTI standard requires RGB pixels to be packed. The Analyze format, however, was used to store both planar RGB and packed RGB depending on the software, without any indication in the header about which convention was being used.

◆ SetQFac()

virtual void vtkNIFTIImageWriter::SetQFac ( double  )
virtual

The QFac sets the ordering of the slices in the NIFTI file.

If QFac is -1, then the slice ordering in the file will be reversed as compared to VTK. Use with caution.

◆ GetQFac()

virtual double vtkNIFTIImageWriter::GetQFac ( )
virtual

The QFac sets the ordering of the slices in the NIFTI file.

If QFac is -1, then the slice ordering in the file will be reversed as compared to VTK. Use with caution.

◆ SetQFormMatrix()

void vtkNIFTIImageWriter::SetQFormMatrix ( vtkMatrix4x4 )

Set the "qform" orientation and offset for the image data.

The 3x3 portion of the matrix must be orthonormal and have a positive determinant, it will be used to compute the quaternion. The last column of the matrix will be used for the offset. In the NIFTI header, the qform_code will be set to 1.

◆ GetQFormMatrix()

vtkMatrix4x4 * vtkNIFTIImageWriter::GetQFormMatrix ( )
inline

Definition at line 129 of file vtkNIFTIImageWriter.h.

◆ SetSFormMatrix()

void vtkNIFTIImageWriter::SetSFormMatrix ( vtkMatrix4x4 )

Set a matrix for the "sform" transformation stored in the file.

Unlike the qform matrix, the sform matrix can contain scaling information. Before being stored in the NIFTI header, the first three columns of the matrix will be multiplied by the voxel spacing. In the NIFTI header, the sform_code will be set to 2.

◆ GetSFormMatrix()

vtkMatrix4x4 * vtkNIFTIImageWriter::GetSFormMatrix ( )
inline

Definition at line 139 of file vtkNIFTIImageWriter.h.

◆ SetNIFTIHeader()

void vtkNIFTIImageWriter::SetNIFTIHeader ( vtkNIFTIImageHeader hdr)

Set the NIFTI header information to use when writing the file.

The data dimensions and pixdim from the supplied header will be ignored. Likewise, the QForm and SForm information in the supplied header will be ignored if you have called SetQFormMatrix() or SetSFormMatrix() to provide the orientation information for the file.

◆ GetNIFTIHeader()

vtkNIFTIImageHeader * vtkNIFTIImageWriter::GetNIFTIHeader ( )

Set the NIFTI header information to use when writing the file.

The data dimensions and pixdim from the supplied header will be ignored. Likewise, the QForm and SForm information in the supplied header will be ignored if you have called SetQFormMatrix() or SetSFormMatrix() to provide the orientation information for the file.

◆ GenerateHeader()

int vtkNIFTIImageWriter::GenerateHeader ( vtkInformation info,
bool  singleFile 
)
protected

Generate the header information for the file.

◆ RequestData()

int vtkNIFTIImageWriter::RequestData ( vtkInformation request,
vtkInformationVector **  inputVector,
vtkInformationVector outputVector 
)
overrideprotectedvirtual

The main execution method, which writes the file.

Reimplemented from vtkImageWriter.

◆ ReplaceExtension()

static char * vtkNIFTIImageWriter::ReplaceExtension ( const char *  filename,
const char *  ext1,
const char *  ext2 
)
staticprotected

Make a new filename by replacing extension "ext1" with "ext2".

The extensions must include a period, must be three characters long, and must be lower case. A new string is returned that must be deleted by the caller.

Member Data Documentation

◆ TimeDimension

int vtkNIFTIImageWriter::TimeDimension
protected

The size and spacing of the Time dimension to use in the file.

Definition at line 180 of file vtkNIFTIImageWriter.h.

◆ TimeSpacing

double vtkNIFTIImageWriter::TimeSpacing
protected

The size and spacing of the Time dimension to use in the file.

Definition at line 181 of file vtkNIFTIImageWriter.h.

◆ RescaleIntercept

double vtkNIFTIImageWriter::RescaleIntercept
protected

Information for rescaling data to quantitative units.

Definition at line 188 of file vtkNIFTIImageWriter.h.

◆ RescaleSlope

double vtkNIFTIImageWriter::RescaleSlope
protected

Information for rescaling data to quantitative units.

Definition at line 189 of file vtkNIFTIImageWriter.h.

◆ QFac

double vtkNIFTIImageWriter::QFac
protected

Is -1 if VTK slice order is opposite to NIFTI slice order, +1 otherwise.

Definition at line 195 of file vtkNIFTIImageWriter.h.

◆ QFormMatrix

vtkMatrix4x4* vtkNIFTIImageWriter::QFormMatrix
protected

The orientation matrices for the NIFTI file.

Definition at line 201 of file vtkNIFTIImageWriter.h.

◆ SFormMatrix

vtkMatrix4x4* vtkNIFTIImageWriter::SFormMatrix
protected

The orientation matrices for the NIFTI file.

Definition at line 202 of file vtkNIFTIImageWriter.h.

◆ Description

char* vtkNIFTIImageWriter::Description
protected

A description of how the file was produced.

Definition at line 208 of file vtkNIFTIImageWriter.h.

◆ NIFTIHeader

vtkNIFTIImageHeader* vtkNIFTIImageWriter::NIFTIHeader
protected

The header information.

Definition at line 214 of file vtkNIFTIImageWriter.h.

◆ OwnHeader

vtkNIFTIImageHeader* vtkNIFTIImageWriter::OwnHeader
protected

The header information.

Definition at line 215 of file vtkNIFTIImageWriter.h.

◆ NIFTIVersion

int vtkNIFTIImageWriter::NIFTIVersion
protected

The header information.

Definition at line 216 of file vtkNIFTIImageWriter.h.

◆ PlanarRGB

bool vtkNIFTIImageWriter::PlanarRGB
protected

Use planar RGB instead of the default (packed).

Definition at line 222 of file vtkNIFTIImageWriter.h.


The documentation for this class was generated from the following file: