vtkVolume16Reader Class Reference

read 16 bit image files More...

#include <vtkVolume16Reader.h>

Inheritance diagram for vtkVolume16Reader:

Collaboration diagram for vtkVolume16Reader:

Public Types
typedef vtkVolumeReader	Superclass
Public Types inherited from vtkVolumeReader
typedef vtkImageAlgorithm	Superclass
Public Types inherited from vtkImageAlgorithm
typedef vtkAlgorithm	Superclass
Public Types inherited from vtkAlgorithm
enum	DesiredOutputPrecision { SINGLE_PRECISION , DOUBLE_PRECISION , DEFAULT_PRECISION }
	Values used for setting the desired output precision for various algorithms. More...
typedef vtkObject	Superclass

Public Member Functions
virtual vtkTypeBool	IsA (const char *type)
	Return 1 if this class is the same type of (or a subclass of) the named class.
vtkVolume16Reader *	NewInstance () const
void	PrintSelf (ostream &os, vtkIndent indent) override
	Methods invoked by print to print information about the object including superclasses.
vtkImageData *	GetImage (int ImageNumber) override
	Other objects make use of these methods.
virtual void	SetDataDimensions (int, int)
	Specify the dimensions for the data.
void	SetDataDimensions (int[2])
	Specify the dimensions for the data.
virtual int *	GetDataDimensions ()
	Specify the dimensions for the data.
virtual void	GetDataDimensions (int data[2])
	Specify the dimensions for the data.
virtual void	SetDataMask (unsigned short)
	Specify a mask used to eliminate data in the data file (e.g., connectivity bits).
virtual unsigned short	GetDataMask ()
	Specify a mask used to eliminate data in the data file (e.g., connectivity bits).
virtual void	SetHeaderSize (int)
	Specify the number of bytes to seek over at start of image.
virtual int	GetHeaderSize ()
	Specify the number of bytes to seek over at start of image.
void	SetDataByteOrderToBigEndian ()
	These methods should be used instead of the SwapBytes methods.
void	SetDataByteOrderToLittleEndian ()
	These methods should be used instead of the SwapBytes methods.
int	GetDataByteOrder ()
	These methods should be used instead of the SwapBytes methods.
void	SetDataByteOrder (int)
	These methods should be used instead of the SwapBytes methods.
const char *	GetDataByteOrderAsString ()
	These methods should be used instead of the SwapBytes methods.
virtual void	SetSwapBytes (vtkTypeBool)
	Turn on/off byte swapping.
virtual vtkTypeBool	GetSwapBytes ()
	Turn on/off byte swapping.
virtual void	SwapBytesOn ()
	Turn on/off byte swapping.
virtual void	SwapBytesOff ()
	Turn on/off byte swapping.
virtual void	SetTransform (vtkTransform *)
	Set/Get transformation matrix to transform the data from slice space into world space.
virtual vtkTransform *	GetTransform ()
	Set/Get transformation matrix to transform the data from slice space into world space.
Public Member Functions inherited from vtkVolumeReader
virtual vtkTypeBool	IsA (const char *type)
	Return 1 if this class is the same type of (or a subclass of) the named class.
vtkVolumeReader *	NewInstance () const
void	PrintSelf (ostream &os, vtkIndent indent) override
	Methods invoked by print to print information about the object including superclasses.
virtual vtkImageData *	GetImage (int ImageNumber)=0
	Other objects make use of this method.
	vtkSetFilePathMacro (FilePrefix)
	Specify file prefix for the image file(s).
	vtkGetFilePathMacro (FilePrefix)
	Specify file prefix for the image file(s).
	vtkSetFilePathMacro (FilePattern)
	The snprintf format used to build filename from FilePrefix and number.
	vtkGetFilePathMacro (FilePattern)
	The snprintf format used to build filename from FilePrefix and number.
virtual void	SetImageRange (int, int)
	Set the range of files to read.
void	SetImageRange (int[2])
	Set the range of files to read.
virtual int *	GetImageRange ()
	Set the range of files to read.
virtual void	GetImageRange (int data[2])
	Set the range of files to read.
virtual void	SetDataSpacing (double, double, double)
	Specify the spacing for the data.
virtual void	SetDataSpacing (double[3])
	Specify the spacing for the data.
virtual double *	GetDataSpacing ()
	Specify the spacing for the data.
virtual void	GetDataSpacing (double data[3])
	Specify the spacing for the data.
virtual void	SetDataOrigin (double, double, double)
	Specify the origin for the data.
virtual void	SetDataOrigin (double[3])
	Specify the origin for the data.
virtual double *	GetDataOrigin ()
	Specify the origin for the data.
virtual void	GetDataOrigin (double data[3])
	Specify the origin for the data.
Public Member Functions inherited from vtkImageAlgorithm
virtual vtkTypeBool	IsA (const char *type)
	Return 1 if this class is the same type of (or a subclass of) the named class.
vtkImageAlgorithm *	NewInstance () const
void	PrintSelf (ostream &os, vtkIndent indent) override
	Methods invoked by print to print information about the object including superclasses.
vtkTypeBool	ProcessRequest (vtkInformation *, vtkInformationVector **, vtkInformationVector *) override
	Process a request from the executive.
vtkImageData *	GetOutput ()
	Get the output data object for a port on this algorithm.
vtkImageData *	GetOutput (int)
	Get the output data object for a port on this algorithm.
virtual void	SetOutput (vtkDataObject *d)
	Get the output data object for a port on this algorithm.
void	SetInputData (vtkDataObject *)
	Assign a data object as input.
void	SetInputData (int, vtkDataObject *)
	Assign a data object as input.
vtkDataObject *	GetInput (int port)
	Get a data object for one of the input port connections.
vtkDataObject *	GetInput ()
	Get a data object for one of the input port connections.
vtkImageData *	GetImageDataInput (int port)
	Get a data object for one of the input port connections.
virtual void	AddInputData (vtkDataObject *)
	Assign a data object as input.
virtual void	AddInputData (int, vtkDataObject *)
	Assign a data object as input.
Public Member Functions inherited from vtkAlgorithm
virtual vtkTypeBool	IsA (const char *type)
	Return 1 if this class is the same type of (or a subclass of) the named class.
vtkAlgorithm *	NewInstance () const
void	PrintSelf (ostream &os, vtkIndent indent) override
	Methods invoked by print to print information about the object including superclasses.
vtkTypeBool	HasExecutive ()
	Check whether this algorithm has an assigned executive.
vtkExecutive *	GetExecutive ()
	Get this algorithm's executive.
virtual void	SetExecutive (vtkExecutive *executive)
	Set this algorithm's executive.
virtual vtkTypeBool	ProcessRequest (vtkInformation *request, vtkInformationVector **inInfo, vtkInformationVector *outInfo)
	Upstream/Downstream requests form the generalized interface through which executives invoke a algorithm's functionality.
vtkTypeBool	ProcessRequest (vtkInformation *request, vtkCollection *inInfo, vtkInformationVector *outInfo)
	Version of ProcessRequest() that is wrapped.
virtual int	ComputePipelineMTime (vtkInformation *request, vtkInformationVector **inInfoVec, vtkInformationVector *outInfoVec, int requestFromOutputPort, vtkMTimeType *mtime)
	A special version of ProcessRequest meant specifically for the pipeline modified time request.
virtual int	ModifyRequest (vtkInformation *request, int when)
	This method gives the algorithm a chance to modify the contents of a request before or after (specified in the when argument) it is forwarded.
vtkInformation *	GetInputPortInformation (int port)
	Get the information object associated with an input port.
vtkInformation *	GetOutputPortInformation (int port)
	Get the information object associated with an output port.
int	GetNumberOfInputPorts ()
	Get the number of input ports used by the algorithm.
int	GetNumberOfOutputPorts ()
	Get the number of output ports provided by the algorithm.
void	SetAbortExecuteAndUpdateTime ()
	Set AbortExecute Flag and update LastAbortTime.
void	UpdateProgress (double amount)
	Update the progress of the process object.
bool	CheckAbort ()
	Checks to see if this filter should abort.
vtkInformation *	GetInputArrayInformation (int idx)
	Get the info object for the specified input array to this algorithm.
void	RemoveAllInputs ()
	Remove all the input data.
vtkDataObject *	GetOutputDataObject (int port)
	Get the data object that will contain the algorithm output for the given port.
vtkDataObject *	GetInputDataObject (int port, int connection)
	Get the data object that will contain the algorithm input for the given port and given connection.
virtual void	RemoveInputConnection (int port, vtkAlgorithmOutput *input)
	Remove a connection from the given input port index.
virtual void	RemoveInputConnection (int port, int idx)
	Remove a connection given by index idx.
virtual void	RemoveAllInputConnections (int port)
	Removes all input connections.
virtual void	SetInputDataObject (int port, vtkDataObject *data)
	Sets the data-object as an input on the given port index.
virtual void	SetInputDataObject (vtkDataObject *data)
virtual void	AddInputDataObject (int port, vtkDataObject *data)
	Add the data-object as an input to this given port.
virtual void	AddInputDataObject (vtkDataObject *data)
vtkAlgorithmOutput *	GetOutputPort (int index)
	Get a proxy object corresponding to the given output port of this algorithm.
vtkAlgorithmOutput *	GetOutputPort ()
int	GetNumberOfInputConnections (int port)
	Get the number of inputs currently connected to a port.
int	GetTotalNumberOfInputConnections ()
	Get the total number of inputs for this algorithm.
vtkAlgorithmOutput *	GetInputConnection (int port, int index)
	Get the algorithm output port connected to an input port.
vtkAlgorithm *	GetInputAlgorithm (int port, int index, int &algPort)
	Returns the algorithm and the output port index of that algorithm connected to a port-index pair.
vtkAlgorithm *	GetInputAlgorithm (int port, int index)
	Returns the algorithm connected to a port-index pair.
vtkAlgorithm *	GetInputAlgorithm ()
	Equivalent to GetInputAlgorithm(0, 0).
vtkExecutive *	GetInputExecutive (int port, int index)
	Returns the executive associated with a particular input connection.
vtkExecutive *	GetInputExecutive ()
	Equivalent to GetInputExecutive(0, 0)
vtkInformation *	GetInputInformation (int port, int index)
	Return the information object that is associated with a particular input connection.
vtkInformation *	GetInputInformation ()
	Equivalent to GetInputInformation(0, 0)
vtkInformation *	GetOutputInformation (int port)
	Return the information object that is associated with a particular output port.
virtual vtkTypeBool	Update (int port, vtkInformationVector *requests)
	This method enables the passing of data requests to the algorithm to be used during execution (in addition to bringing a particular port up-to-date).
virtual vtkTypeBool	Update (vtkInformation *requests)
	Convenience method to update an algorithm after passing requests to its first output port.
virtual int	UpdatePiece (int piece, int numPieces, int ghostLevels, const int extents[6]=nullptr)
	Convenience method to update an algorithm after passing requests to its first output port.
virtual VTK_UNBLOCKTHREADS int	UpdateExtent (const int extents[6])
	Convenience method to update an algorithm after passing requests to its first output port.
virtual VTK_UNBLOCKTHREADS int	UpdateTimeStep (double time, int piece=-1, int numPieces=1, int ghostLevels=0, const int extents[6]=nullptr)
	Convenience method to update an algorithm after passing requests to its first output port.
virtual VTK_UNBLOCKTHREADS void	UpdateInformation ()
	Bring the algorithm's information up-to-date.
virtual void	UpdateDataObject ()
	Create output object(s).
virtual void	PropagateUpdateExtent ()
	Propagate meta-data upstream.
virtual VTK_UNBLOCKTHREADS void	UpdateWholeExtent ()
	Bring this algorithm's outputs up-to-date.
void	ConvertTotalInputToPortConnection (int ind, int &port, int &conn)
	Convenience routine to convert from a linear ordering of input connections to a port/connection pair.
void	RemoveNoPriorTemporalAccessInformationKey ()
	Removes any information key vtkStreamingDemandDrivenPipeline::NO_PRIOR_TEMPORAL_ACCESS() to all output ports of this vtkAlgorithm.
virtual vtkInformation *	GetInformation ()
	Set/Get the information object associated with this algorithm.
virtual void	SetInformation (vtkInformation *)
	Set/Get the information object associated with this algorithm.
bool	UsesGarbageCollector () const override
	Participate in garbage collection.
virtual void	SetAbortExecute (vtkTypeBool)
	Set/Get the AbortExecute flag for the process object.
virtual vtkTypeBool	GetAbortExecute ()
	Set/Get the AbortExecute flag for the process object.
virtual void	AbortExecuteOn ()
	Set/Get the AbortExecute flag for the process object.
virtual void	AbortExecuteOff ()
	Set/Get the AbortExecute flag for the process object.
virtual double	GetProgress ()
	Get the execution progress of a process object.
void	SetContainerAlgorithm (vtkAlgorithm *containerAlg)
	Set/get a Container algorithm for this algorithm.
vtkAlgorithm *	GetContainerAlgorithm ()
	Set/get a Container algorithm for this algorithm.
virtual void	SetAbortOutput (bool)
	Set/Get an internal variable used to communicate between the algorithm and executive.
virtual bool	GetAbortOutput ()
	Set/Get an internal variable used to communicate between the algorithm and executive.
void	SetProgressShiftScale (double shift, double scale)
	Specify the shift and scale values to use to apply to the progress amount when UpdateProgress is called.
virtual double	GetProgressShift ()
	Specify the shift and scale values to use to apply to the progress amount when UpdateProgress is called.
virtual double	GetProgressScale ()
	Specify the shift and scale values to use to apply to the progress amount when UpdateProgress is called.
void	SetProgressText (const char *ptext)
	Set the current text message associated with the progress state.
virtual char *	GetProgressText ()
	Set the current text message associated with the progress state.
virtual unsigned long	GetErrorCode ()
	The error code contains a possible error that occurred while reading or writing the file.
void	SetInputArrayToProcess (const char *name, int fieldAssociation)
	Set the input data arrays that this algorithm will process.
virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, const char *name)
	Set the input data arrays that this algorithm will process.
virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, int fieldAttributeType)
	Set the input data arrays that this algorithm will process.
virtual void	SetInputArrayToProcess (int idx, vtkInformation *info)
	Set the input data arrays that this algorithm will process.
virtual void	SetInputArrayToProcess (int idx, int port, int connection, const char *fieldAssociation, const char *attributeTypeorName)
	Set the input data arrays that this algorithm will process.
virtual void	SetInputConnection (int port, vtkAlgorithmOutput *input)
	Set the connection for the given input port index.
virtual void	SetInputConnection (vtkAlgorithmOutput *input)
	Set the connection for the given input port index.
virtual void	AddInputConnection (int port, vtkAlgorithmOutput *input)
	Add a connection to the given input port index.
virtual void	AddInputConnection (vtkAlgorithmOutput *input)
	Add a connection to the given input port index.
virtual VTK_UNBLOCKTHREADS void	Update (int port)
	Bring this algorithm's outputs up-to-date.
virtual VTK_UNBLOCKTHREADS void	Update ()
	Bring this algorithm's outputs up-to-date.
virtual void	SetReleaseDataFlag (vtkTypeBool)
	Turn release data flag on or off for all output ports.
virtual vtkTypeBool	GetReleaseDataFlag ()
	Turn release data flag on or off for all output ports.
void	ReleaseDataFlagOn ()
	Turn release data flag on or off for all output ports.
void	ReleaseDataFlagOff ()
	Turn release data flag on or off for all output ports.
int	UpdateExtentIsEmpty (vtkInformation *pinfo, vtkDataObject *output)
	This detects when the UpdateExtent will generate no data This condition is satisfied when the UpdateExtent has zero volume (0,-1,...) or the UpdateNumberOfPieces is 0.
int	UpdateExtentIsEmpty (vtkInformation *pinfo, int extentType)
	This detects when the UpdateExtent will generate no data This condition is satisfied when the UpdateExtent has zero volume (0,-1,...) or the UpdateNumberOfPieces is 0.
int *	GetUpdateExtent ()
	These functions return the update extent for output ports that use 3D extents.
int *	GetUpdateExtent (int port)
	These functions return the update extent for output ports that use 3D extents.
void	GetUpdateExtent (int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
	These functions return the update extent for output ports that use 3D extents.
void	GetUpdateExtent (int port, int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
	These functions return the update extent for output ports that use 3D extents.
void	GetUpdateExtent (int extent[6])
	These functions return the update extent for output ports that use 3D extents.
void	GetUpdateExtent (int port, int extent[6])
	These functions return the update extent for output ports that use 3D extents.
int	GetUpdatePiece ()
	These functions return the update extent for output ports that use piece extents.
int	GetUpdatePiece (int port)
	These functions return the update extent for output ports that use piece extents.
int	GetUpdateNumberOfPieces ()
	These functions return the update extent for output ports that use piece extents.
int	GetUpdateNumberOfPieces (int port)
	These functions return the update extent for output ports that use piece extents.
int	GetUpdateGhostLevel ()
	These functions return the update extent for output ports that use piece extents.
int	GetUpdateGhostLevel (int port)
	These functions return the update extent for output ports that use piece extents.
void	SetProgressObserver (vtkProgressObserver *)
	If an ProgressObserver is set, the algorithm will report progress through it rather than directly.
virtual vtkProgressObserver *	GetProgressObserver ()
	If an ProgressObserver is set, the algorithm will report progress through it rather than directly.
void	SetNoPriorTemporalAccessInformationKey (int key)
	Set to all output ports of this algorithm the information key vtkStreamingDemandDrivenPipeline::NO_PRIOR_TEMPORAL_ACCESS().
void	SetNoPriorTemporalAccessInformationKey ()
	Set to all output ports of this algorithm the information key vtkStreamingDemandDrivenPipeline::NO_PRIOR_TEMPORAL_ACCESS().
Public Member Functions inherited from vtkObject
	vtkBaseTypeMacro (vtkObject, vtkObjectBase)
virtual void	DebugOn ()
	Turn debugging output on.
virtual void	DebugOff ()
	Turn debugging output off.
bool	GetDebug ()
	Get the value of the debug flag.
void	SetDebug (bool debugFlag)
	Set the value of the debug flag.
virtual void	Modified ()
	Update the modification time for this object.
virtual vtkMTimeType	GetMTime ()
	Return this object's modified time.
void	PrintSelf (ostream &os, vtkIndent indent) override
	Methods invoked by print to print information about the object including superclasses.
void	RemoveObserver (unsigned long tag)
void	RemoveObservers (unsigned long event)
void	RemoveObservers (const char *event)
void	RemoveAllObservers ()
vtkTypeBool	HasObserver (unsigned long event)
vtkTypeBool	HasObserver (const char *event)
vtkTypeBool	InvokeEvent (unsigned long event)
vtkTypeBool	InvokeEvent (const char *event)
std::string	GetObjectDescription () const override
	The object description printed in messages and PrintSelf output.
unsigned long	AddObserver (unsigned long event, vtkCommand *, float priority=0.0f)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
unsigned long	AddObserver (const char *event, vtkCommand *, float priority=0.0f)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
vtkCommand *	GetCommand (unsigned long tag)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
void	RemoveObserver (vtkCommand *)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
void	RemoveObservers (unsigned long event, vtkCommand *)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
void	RemoveObservers (const char *event, vtkCommand *)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
vtkTypeBool	HasObserver (unsigned long event, vtkCommand *)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
vtkTypeBool	HasObserver (const char *event, vtkCommand *)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, void(T::*callback)(), float priority=0.0f)
	Overloads to AddObserver that allow developers to add class member functions as callbacks for events.
template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, void(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
	Overloads to AddObserver that allow developers to add class member functions as callbacks for events.
template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, bool(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
	Allow user to set the AbortFlagOn() with the return value of the callback method.
vtkTypeBool	InvokeEvent (unsigned long event, void *callData)
	This method invokes an event and return whether the event was aborted or not.
vtkTypeBool	InvokeEvent (const char *event, void *callData)
	This method invokes an event and return whether the event was aborted or not.
virtual void	SetObjectName (const std::string &objectName)
	Set/get the name of this object for reporting purposes.
virtual std::string	GetObjectName () const
	Set/get the name of this object for reporting purposes.
Public Member Functions inherited from vtkObjectBase
const char *	GetClassName () const
	Return the class name as a string.
virtual std::string	GetObjectDescription () const
	The object description printed in messages and PrintSelf output.
virtual vtkTypeBool	IsA (const char *name)
	Return 1 if this class is the same type of (or a subclass of) the named class.
virtual vtkIdType	GetNumberOfGenerationsFromBase (const char *name)
	Given the name of a base class of this class type, return the distance of inheritance between this class type and the named class (how many generations of inheritance are there between this class and the named class).
virtual void	Delete ()
	Delete a VTK object.
virtual void	FastDelete ()
	Delete a reference to this object.
void	InitializeObjectBase ()
void	Print (ostream &os)
	Print an object to an ostream.
void	Register (vtkObjectBase *o)
	Increase the reference count (mark as used by another object).
virtual void	UnRegister (vtkObjectBase *o)
	Decrease the reference count (release by another object).
int	GetReferenceCount ()
	Return the current reference count of this object.
void	SetReferenceCount (int)
	Sets the reference count.
bool	GetIsInMemkind () const
	A local state flag that remembers whether this object lives in the normal or extended memory space.
virtual void	PrintHeader (ostream &os, vtkIndent indent)
	Methods invoked by print to print information about the object including superclasses.
virtual void	PrintTrailer (ostream &os, vtkIndent indent)
	Methods invoked by print to print information about the object including superclasses.

Static Public Member Functions
static vtkTypeBool	IsTypeOf (const char *type)
static vtkVolume16Reader *	SafeDownCast (vtkObjectBase *o)
static vtkVolume16Reader *	New ()
	Construct object with nullptr file prefix; file pattern "%s.%d"; image range set to (1,1); data origin (0,0,0); data spacing (1,1,1); no data mask; header size 0; and byte swapping turned off.
Static Public Member Functions inherited from vtkVolumeReader
static vtkTypeBool	IsTypeOf (const char *type)
static vtkVolumeReader *	SafeDownCast (vtkObjectBase *o)
Static Public Member Functions inherited from vtkImageAlgorithm
static vtkTypeBool	IsTypeOf (const char *type)
static vtkImageAlgorithm *	SafeDownCast (vtkObjectBase *o)
Static Public Member Functions inherited from vtkAlgorithm
static vtkAlgorithm *	New ()
static vtkTypeBool	IsTypeOf (const char *type)
static vtkAlgorithm *	SafeDownCast (vtkObjectBase *o)
static vtkInformationIntegerKey *	INPUT_IS_OPTIONAL ()
	Keys used to specify input port requirements.
static vtkInformationIntegerKey *	INPUT_IS_REPEATABLE ()
static vtkInformationInformationVectorKey *	INPUT_REQUIRED_FIELDS ()
static vtkInformationStringVectorKey *	INPUT_REQUIRED_DATA_TYPE ()
static vtkInformationInformationVectorKey *	INPUT_ARRAYS_TO_PROCESS ()
static vtkInformationIntegerKey *	INPUT_PORT ()
static vtkInformationIntegerKey *	INPUT_CONNECTION ()
static vtkInformationIntegerKey *	CAN_PRODUCE_SUB_EXTENT ()
	This key tells the executive that a particular output port is capable of producing an arbitrary subextent of the whole extent.
static vtkInformationIntegerKey *	CAN_HANDLE_PIECE_REQUEST ()
	Key that tells the pipeline that a particular algorithm can or cannot handle piece request.
static vtkInformationIntegerKey *	ABORTED ()
static void	SetDefaultExecutivePrototype (vtkExecutive *proto)
	If the DefaultExecutivePrototype is set, a copy of it is created in CreateDefaultExecutive() using NewInstance().
Static Public Member Functions inherited from vtkObject
static vtkObject *	New ()
	Create an object with Debug turned off, modified time initialized to zero, and reference counting on.
static void	BreakOnError ()
	This method is called when vtkErrorMacro executes.
static void	SetGlobalWarningDisplay (vtkTypeBool val)
	This is a global flag that controls whether any debug, warning or error messages are displayed.
static void	GlobalWarningDisplayOn ()
	This is a global flag that controls whether any debug, warning or error messages are displayed.
static void	GlobalWarningDisplayOff ()
	This is a global flag that controls whether any debug, warning or error messages are displayed.
static vtkTypeBool	GetGlobalWarningDisplay ()
	This is a global flag that controls whether any debug, warning or error messages are displayed.
Static Public Member Functions inherited from vtkObjectBase
static vtkTypeBool	IsTypeOf (const char *name)
	Return 1 if this class type is the same type of (or a subclass of) the named class.
static vtkIdType	GetNumberOfGenerationsFromBaseType (const char *name)
	Given a the name of a base class of this class type, return the distance of inheritance between this class type and the named class (how many generations of inheritance are there between this class and the named class).
static vtkObjectBase *	New ()
	Create an object with Debug turned off, modified time initialized to zero, and reference counting on.
static void	SetMemkindDirectory (const char *directoryname)
	The name of a directory, ideally mounted -o dax, to memory map an extended memory space within.
static bool	GetUsingMemkind ()
	A global state flag that controls whether vtkObjects are constructed in the usual way (the default) or within the extended memory space.

Protected Member Functions
virtual vtkObjectBase *	NewInstanceInternal () const
	vtkVolume16Reader ()
	~vtkVolume16Reader () override
int	RequestData (vtkInformation *, vtkInformationVector **, vtkInformationVector *) override
	This is called in response to a REQUEST_DATA request from the executive.
int	RequestInformation (vtkInformation *, vtkInformationVector **, vtkInformationVector *) override
	Subclasses can reimplement this method to collect information from their inputs and set information for their outputs.
void	TransformSlice (unsigned short *slice, unsigned short *pixels, int k, int dimensions[3], int bounds[6])
void	ComputeTransformedDimensions (int dimensions[3])
void	ComputeTransformedBounds (int bounds[6])
void	ComputeTransformedSpacing (double Spacing[3])
void	ComputeTransformedOrigin (double origin[3])
void	AdjustSpacingAndOrigin (int dimensions[3], double Spacing[3], double origin[3])
void	ReadImage (int ImageNumber, vtkUnsignedShortArray *)
void	ReadVolume (int FirstImage, int LastImage, vtkUnsignedShortArray *)
int	Read16BitImage (FILE *fp, unsigned short *pixels, int xsize, int ysize, int skip, int swapBytes)
Protected Member Functions inherited from vtkVolumeReader
virtual vtkObjectBase *	NewInstanceInternal () const
	vtkVolumeReader ()
	~vtkVolumeReader () override
Protected Member Functions inherited from vtkImageAlgorithm
virtual vtkObjectBase *	NewInstanceInternal () const
	vtkImageAlgorithm ()
	~vtkImageAlgorithm () override
virtual int	RequestInformation (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector)
	Subclasses can reimplement this method to collect information from their inputs and set information for their outputs.
virtual int	RequestUpdateExtent (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
	Subclasses can reimplement this method to translate the update extent requests from each output port into update extent requests for the input connections.
virtual int	RequestUpdateTime (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
virtual void	CopyInputArrayAttributesToOutput (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector)
	Convenience method to copy the scalar type and number of components from the input data to the output data.
virtual int	RequestData (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector)
	This is called in response to a REQUEST_DATA request from the executive.
virtual void	ExecuteDataWithInformation (vtkDataObject *output, vtkInformation *outInfo)
	This is a convenience method that is implemented in many subclasses instead of RequestData.
virtual void	CopyAttributeData (vtkImageData *in, vtkImageData *out, vtkInformationVector **inputVector)
	Copy the other point and cell data.
virtual void	ExecuteData (vtkDataObject *output)
	This method is the old style execute method, provided for the sake of backwards compatibility with older filters and readers.
virtual void	Execute ()
	This method is the old style execute method, provided for the sake of backwards compatibility with older filters and readers.
virtual void	AllocateOutputData (vtkImageData *out, vtkInformation *outInfo, int *uExtent)
	Allocate the output data.
virtual vtkImageData *	AllocateOutputData (vtkDataObject *out, vtkInformation *outInfo)
	Allocate the output data.
int	FillOutputPortInformation (int port, vtkInformation *info) override
	These method should be reimplemented by subclasses that have more than a single input or single output.
int	FillInputPortInformation (int port, vtkInformation *info) override
	These method should be reimplemented by subclasses that have more than a single input or single output.
Protected Member Functions inherited from vtkAlgorithm
virtual vtkObjectBase *	NewInstanceInternal () const
	vtkAlgorithm ()
	~vtkAlgorithm () override
bool	CheckUpstreamAbort ()
	Checks to see if an upstream filter has been aborted.
virtual int	FillInputPortInformation (int port, vtkInformation *info)
	Fill the input port information objects for this algorithm.
virtual int	FillOutputPortInformation (int port, vtkInformation *info)
	Fill the output port information objects for this algorithm.
virtual void	SetNumberOfInputPorts (int n)
	Set the number of input ports used by the algorithm.
virtual void	SetNumberOfOutputPorts (int n)
	Set the number of output ports provided by the algorithm.
int	InputPortIndexInRange (int index, const char *action)
int	OutputPortIndexInRange (int index, const char *action)
int	GetInputArrayAssociation (int idx, vtkInformationVector **inputVector)
	Get the association of the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass.
vtkInformation *	GetInputArrayFieldInformation (int idx, vtkInformationVector **inputVector)
	This method takes in an index (as specified in SetInputArrayToProcess) and a pipeline information vector.
virtual vtkExecutive *	CreateDefaultExecutive ()
	Create a default executive.
void	ReportReferences (vtkGarbageCollector *) override
virtual void	SetNthInputConnection (int port, int index, vtkAlgorithmOutput *input)
	Replace the Nth connection on the given input port.
virtual void	SetNumberOfInputConnections (int port, int n)
	Set the number of input connections on the given input port.
void	SetInputDataInternal (int port, vtkDataObject *input)
	These methods are used by subclasses to implement methods to set data objects directly as input.
void	AddInputDataInternal (int port, vtkDataObject *input)
int	GetInputArrayAssociation (int idx, int connection, vtkInformationVector **inputVector)
	Filters that have multiple connections on one port can use this signature.
int	GetInputArrayAssociation (int idx, vtkDataObject *input)
	Filters that have multiple connections on one port can use this signature.
vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector)
	Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass.
vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
	Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass.
vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
	Filters that have multiple connections on one port can use this signature.
vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
	Filters that have multiple connections on one port can use this signature.
vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input)
	Filters that have multiple connections on one port can use this signature.
vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input, int &association)
	Filters that have multiple connections on one port can use this signature.
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector)
	Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass.
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
	Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass.
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
	Filters that have multiple connections on one port can use this signature.
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
	Filters that have multiple connections on one port can use this signature.
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input)
	Filters that have multiple connections on one port can use this signature.
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input, int &association)
	Filters that have multiple connections on one port can use this signature.
virtual void	SetErrorCode (unsigned long)
	The error code contains a possible error that occurred while reading or writing the file.
Protected Member Functions inherited from vtkObject
	vtkObject ()
	~vtkObject () override
void	RegisterInternal (vtkObjectBase *, vtkTypeBool check) override
void	UnRegisterInternal (vtkObjectBase *, vtkTypeBool check) override
void	InternalGrabFocus (vtkCommand *mouseEvents, vtkCommand *keypressEvents=nullptr)
	These methods allow a command to exclusively grab all events.
void	InternalReleaseFocus ()
	These methods allow a command to exclusively grab all events.
Protected Member Functions inherited from vtkObjectBase
	vtkObjectBase ()
virtual	~vtkObjectBase ()
virtual void	RegisterInternal (vtkObjectBase *, vtkTypeBool check)
virtual void	UnRegisterInternal (vtkObjectBase *, vtkTypeBool check)
virtual void	ReportReferences (vtkGarbageCollector *)
virtual void	ObjectFinalize ()
	vtkObjectBase (const vtkObjectBase &)
void	operator= (const vtkObjectBase &)

Protected Attributes
int	DataDimensions [2]
unsigned short	DataMask
vtkTypeBool	SwapBytes
int	HeaderSize
vtkTransform *	Transform
Protected Attributes inherited from vtkVolumeReader
char *	FilePrefix
char *	FilePattern
int	ImageRange [2]
double	DataSpacing [3]
double	DataOrigin [3]
Protected Attributes inherited from vtkAlgorithm
vtkTimeStamp	LastAbortCheckTime
vtkInformation *	Information
double	Progress
char *	ProgressText
vtkProgressObserver *	ProgressObserver
unsigned long	ErrorCode
	The error code contains a possible error that occurred while reading or writing the file.
Protected Attributes inherited from vtkObject
bool	Debug
vtkTimeStamp	MTime
vtkSubjectHelper *	SubjectHelper
std::string	ObjectName
Protected Attributes inherited from vtkObjectBase
std::atomic< int32_t >	ReferenceCount
vtkWeakPointerBase **	WeakPointers

Additional Inherited Members
Public Attributes inherited from vtkAlgorithm
std::atomic< vtkTypeBool >	AbortExecute
Static Protected Member Functions inherited from vtkAlgorithm
static vtkInformationIntegerKey *	PORT_REQUIREMENTS_FILLED ()
Static Protected Member Functions inherited from vtkObjectBase
static vtkMallocingFunction	GetCurrentMallocFunction ()
static vtkReallocingFunction	GetCurrentReallocFunction ()
static vtkFreeingFunction	GetCurrentFreeFunction ()
static vtkFreeingFunction	GetAlternateFreeFunction ()
Static Protected Attributes inherited from vtkAlgorithm
static vtkTimeStamp	LastAbortTime
static vtkExecutive *	DefaultExecutivePrototype

Detailed Description

read 16 bit image files

vtkVolume16Reader is a source object that reads 16 bit image files.

Volume16Reader creates structured point datasets. The dimension of the dataset depends upon the number of files read. Reading a single file results in a 2D image, while reading more than one file results in a 3D volume.

File names are created using FilePattern and FilePrefix as follows: snprintf (filename, sizeof(filename), FilePattern, FilePrefix, number); where number is in the range ImageRange[0] to ImageRange[1]. If ImageRange[1] <= ImageRange[0], then slice number ImageRange[0] is read. Thus to read an image set ImageRange[0] = ImageRange[1] = slice number. The default behavior is to read a single file (i.e., image slice 1).

The DataMask instance variable is used to read data files with embedded connectivity or segmentation information. For example, some data has the high order bit set to indicate connected surface. The DataMask allows you to select this data. Other important ivars include HeaderSize, which allows you to skip over initial info, and SwapBytes, which turns on/off byte swapping.

The Transform instance variable specifies a permutation transformation to map slice space into world space. vtkImageReader has replaced the functionality of this class and should be used instead.

See also

vtkSliceCubes vtkMarchingCubes vtkImageReader

Examples:

vtkVolume16Reader (Examples)

Tests:

vtkVolume16Reader (Tests)

Definition at line 56 of file vtkVolume16Reader.h.

Member Typedef Documentation

Superclass

typedef vtkVolumeReader vtkVolume16Reader::Superclass

Definition at line 59 of file vtkVolume16Reader.h.

Constructor & Destructor Documentation

vtkVolume16Reader()

vtkVolume16Reader::vtkVolume16Reader ( )

protected

~vtkVolume16Reader()

vtkVolume16Reader::~vtkVolume16Reader ( )

overrideprotected

Member Function Documentation

IsTypeOf()

static vtkTypeBool vtkVolume16Reader::IsTypeOf ( const char *  type )

static

IsA()

virtual vtkTypeBool vtkVolume16Reader::IsA ( const char *  name )

virtual

Return 1 if this class is the same type of (or a subclass of) the named class.

Returns 0 otherwise. This method works in combination with vtkTypeMacro found in vtkSetGet.h.

Reimplemented from vtkVolumeReader.

SafeDownCast()

static vtkVolume16Reader * vtkVolume16Reader::SafeDownCast ( vtkObjectBase *  o )

static

NewInstanceInternal()

virtual vtkObjectBase * vtkVolume16Reader::NewInstanceInternal ( ) const

protectedvirtual

Reimplemented from vtkVolumeReader.

NewInstance()

vtkVolume16Reader * vtkVolume16Reader::NewInstance

(

)

const

PrintSelf()

void vtkVolume16Reader::PrintSelf ( ostream &  os, vtkIndent  indent  )

overridevirtual

Methods invoked by print to print information about the object including superclasses.

Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from vtkImageAlgorithm.

New()

static vtkVolume16Reader * vtkVolume16Reader::New ( )

static

Construct object with nullptr file prefix; file pattern "%s.%d"; image range set to (1,1); data origin (0,0,0); data spacing (1,1,1); no data mask; header size 0; and byte swapping turned off.

SetDataDimensions() [1/2]

virtual void vtkVolume16Reader::SetDataDimensions ( int  , int    )

virtual

Specify the dimensions for the data.

SetDataDimensions() [2/2]

void vtkVolume16Reader::SetDataDimensions

(

int

[2]

)

Specify the dimensions for the data.

GetDataDimensions() [1/2]

virtual int * vtkVolume16Reader::GetDataDimensions ( )

virtual

Specify the dimensions for the data.

GetDataDimensions() [2/2]

virtual void vtkVolume16Reader::GetDataDimensions ( int  data[2] )

virtual

Specify the dimensions for the data.

SetDataMask()

virtual void vtkVolume16Reader::SetDataMask ( unsigned short  )

virtual

Specify a mask used to eliminate data in the data file (e.g., connectivity bits).

GetDataMask()

virtual unsigned short vtkVolume16Reader::GetDataMask ( )

virtual

Specify a mask used to eliminate data in the data file (e.g., connectivity bits).

SetHeaderSize()

virtual void vtkVolume16Reader::SetHeaderSize ( int  )

virtual

Specify the number of bytes to seek over at start of image.

GetHeaderSize()

virtual int vtkVolume16Reader::GetHeaderSize ( )

virtual

Specify the number of bytes to seek over at start of image.

SetDataByteOrderToBigEndian()

void vtkVolume16Reader::SetDataByteOrderToBigEndian

(

)

These methods should be used instead of the SwapBytes methods.

They indicate the byte ordering of the file you are trying to read in. These methods will then either swap or not swap the bytes depending on the byte ordering of the machine it is being run on. For example, reading in a BigEndian file on a BigEndian machine will result in no swapping. Trying to read the same file on a LittleEndian machine will result in swapping. As a quick note most UNIX machines are BigEndian while PC's and VAX tend to be LittleEndian. So if the file you are reading in was generated on a VAX or PC, SetDataByteOrderToLittleEndian otherwise SetDataByteOrderToBigEndian.

SetDataByteOrderToLittleEndian()

void vtkVolume16Reader::SetDataByteOrderToLittleEndian

(

)

These methods should be used instead of the SwapBytes methods.

They indicate the byte ordering of the file you are trying to read in. These methods will then either swap or not swap the bytes depending on the byte ordering of the machine it is being run on. For example, reading in a BigEndian file on a BigEndian machine will result in no swapping. Trying to read the same file on a LittleEndian machine will result in swapping. As a quick note most UNIX machines are BigEndian while PC's and VAX tend to be LittleEndian. So if the file you are reading in was generated on a VAX or PC, SetDataByteOrderToLittleEndian otherwise SetDataByteOrderToBigEndian.

GetDataByteOrder()

int vtkVolume16Reader::GetDataByteOrder

(

)

These methods should be used instead of the SwapBytes methods.

They indicate the byte ordering of the file you are trying to read in. These methods will then either swap or not swap the bytes depending on the byte ordering of the machine it is being run on. For example, reading in a BigEndian file on a BigEndian machine will result in no swapping. Trying to read the same file on a LittleEndian machine will result in swapping. As a quick note most UNIX machines are BigEndian while PC's and VAX tend to be LittleEndian. So if the file you are reading in was generated on a VAX or PC, SetDataByteOrderToLittleEndian otherwise SetDataByteOrderToBigEndian.

SetDataByteOrder()

void vtkVolume16Reader::SetDataByteOrder

(

int

)

These methods should be used instead of the SwapBytes methods.

They indicate the byte ordering of the file you are trying to read in. These methods will then either swap or not swap the bytes depending on the byte ordering of the machine it is being run on. For example, reading in a BigEndian file on a BigEndian machine will result in no swapping. Trying to read the same file on a LittleEndian machine will result in swapping. As a quick note most UNIX machines are BigEndian while PC's and VAX tend to be LittleEndian. So if the file you are reading in was generated on a VAX or PC, SetDataByteOrderToLittleEndian otherwise SetDataByteOrderToBigEndian.

GetDataByteOrderAsString()

const char * vtkVolume16Reader::GetDataByteOrderAsString

(

)

These methods should be used instead of the SwapBytes methods.

They indicate the byte ordering of the file you are trying to read in. These methods will then either swap or not swap the bytes depending on the byte ordering of the machine it is being run on. For example, reading in a BigEndian file on a BigEndian machine will result in no swapping. Trying to read the same file on a LittleEndian machine will result in swapping. As a quick note most UNIX machines are BigEndian while PC's and VAX tend to be LittleEndian. So if the file you are reading in was generated on a VAX or PC, SetDataByteOrderToLittleEndian otherwise SetDataByteOrderToBigEndian.

SetSwapBytes()

virtual void vtkVolume16Reader::SetSwapBytes ( vtkTypeBool  )

virtual

Turn on/off byte swapping.

GetSwapBytes()

virtual vtkTypeBool vtkVolume16Reader::GetSwapBytes ( )

virtual

Turn on/off byte swapping.

SwapBytesOn()

virtual void vtkVolume16Reader::SwapBytesOn ( )

virtual

Turn on/off byte swapping.

SwapBytesOff()

virtual void vtkVolume16Reader::SwapBytesOff ( )

virtual

Turn on/off byte swapping.

SetTransform()

virtual void vtkVolume16Reader::SetTransform ( vtkTransform *  )

virtual

Set/Get transformation matrix to transform the data from slice space into world space.

This matrix must be a permutation matrix. To qualify, the sums of the rows must be + or - 1.

GetTransform()

virtual vtkTransform * vtkVolume16Reader::GetTransform ( )

virtual

Set/Get transformation matrix to transform the data from slice space into world space.

This matrix must be a permutation matrix. To qualify, the sums of the rows must be + or - 1.

GetImage()

vtkImageData * vtkVolume16Reader::GetImage ( int  ImageNumber )

overridevirtual

Other objects make use of these methods.

Implements vtkVolumeReader.

RequestData()

int vtkVolume16Reader::RequestData ( vtkInformation *  request, vtkInformationVector **  inputVector, vtkInformationVector *  outputVector  )

overrideprotectedvirtual

This is called in response to a REQUEST_DATA request from the executive.

Subclasses should override either this method or the ExecuteDataWithInformation method in order to generate data for their outputs. For images, the output arrays will already be allocated, so all that is necessary is to fill in the voxel values.

Reimplemented from vtkImageAlgorithm.

RequestInformation()

int vtkVolume16Reader::RequestInformation ( vtkInformation *  request, vtkInformationVector **  inputVector, vtkInformationVector *  outputVector  )

overrideprotectedvirtual

Subclasses can reimplement this method to collect information from their inputs and set information for their outputs.

Reimplemented from vtkImageAlgorithm.

TransformSlice()

void vtkVolume16Reader::TransformSlice ( unsigned short *  slice, unsigned short *  pixels, int  k, int  dimensions[3], int  bounds[6]  )

protected

ComputeTransformedDimensions()

void vtkVolume16Reader::ComputeTransformedDimensions ( int  dimensions[3] )

protected

ComputeTransformedBounds()

void vtkVolume16Reader::ComputeTransformedBounds ( int  bounds[6] )

protected

ComputeTransformedSpacing()

void vtkVolume16Reader::ComputeTransformedSpacing ( double  Spacing[3] )

protected

ComputeTransformedOrigin()

void vtkVolume16Reader::ComputeTransformedOrigin ( double  origin[3] )

protected

AdjustSpacingAndOrigin()

void vtkVolume16Reader::AdjustSpacingAndOrigin ( int  dimensions[3], double  Spacing[3], double  origin[3]  )

protected

ReadImage()

void vtkVolume16Reader::ReadImage ( int  ImageNumber, vtkUnsignedShortArray *    )

protected

ReadVolume()

void vtkVolume16Reader::ReadVolume ( int  FirstImage, int  LastImage, vtkUnsignedShortArray *    )

protected

Read16BitImage()

int vtkVolume16Reader::Read16BitImage ( FILE *  fp, unsigned short *  pixels, int  xsize, int  ysize, int  skip, int  swapBytes  )

protected

Member Data Documentation

DataDimensions

int vtkVolume16Reader::DataDimensions[2]

protected

Definition at line 145 of file vtkVolume16Reader.h.

DataMask

unsigned short vtkVolume16Reader::DataMask

protected

Definition at line 146 of file vtkVolume16Reader.h.

SwapBytes

vtkTypeBool vtkVolume16Reader::SwapBytes

protected

Definition at line 147 of file vtkVolume16Reader.h.

HeaderSize

int vtkVolume16Reader::HeaderSize

protected

Definition at line 148 of file vtkVolume16Reader.h.

Transform

vtkTransform* vtkVolume16Reader::Transform

protected

Definition at line 149 of file vtkVolume16Reader.h.

---

The documentation for this class was generated from the following file:

• IO/Image/vtkVolume16Reader.h