VTK  9.5.20251218
vtkKMeansStatistics.h
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1// SPDX-FileCopyrightText: Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
2// SPDX-FileCopyrightText: Copyright 2010 Sandia Corporation
3// SPDX-License-Identifier: LicenseRef-BSD-3-Clause-Sandia-USGov
102
103#ifndef vtkKMeansStatistics_h
104#define vtkKMeansStatistics_h
105
106#include "vtkFiltersStatisticsModule.h" // For export macro
108
109VTK_ABI_NAMESPACE_BEGIN
110class vtkIdTypeArray;
111class vtkIntArray;
112class vtkDoubleArray;
115
116class VTKFILTERSSTATISTICS_EXPORT vtkKMeansStatistics : public vtkStatisticsAlgorithm
117{
118public:
120 void PrintSelf(ostream& os, vtkIndent indent) override;
122
124
130
132
135 vtkSetMacro(DefaultNumberOfClusters, int);
136 vtkGetMacro(DefaultNumberOfClusters, int);
138
140
143 vtkSetStringMacro(KValuesArrayName);
144 vtkGetStringMacro(KValuesArrayName);
146
148
152 vtkSetMacro(MaxNumIterations, int);
153 vtkGetMacro(MaxNumIterations, int);
155
157
161 vtkSetMacro(Tolerance, double);
162 vtkGetMacro(Tolerance, double);
164
169 bool Aggregate(vtkDataObjectCollection*, vtkStatisticalModel*) override { return false; }
170
174 bool SetParameter(const char* parameter, int index, vtkVariant value) override;
175
177 void AppendAlgorithmParameters(std::string& algorithmParameters) const override;
178
181 vtkStringToken parameterName, const std::string& algorithmParameters) override;
182
183protected:
186
191
196
201
206
211 AssessFunctor*& dfunc) override;
212
218 virtual void UpdateClusterCenters(vtkTable* newClusterElements, vtkTable* curClusterElements,
219 vtkIdTypeArray* numMembershipChanges, vtkIdTypeArray* numDataElementsInCluster,
220 vtkDoubleArray* error, vtkIdTypeArray* startRunID, vtkIdTypeArray* endRunID,
221 vtkIntArray* computeRun);
222
229
237 vtkTable* dataElements, vtkIdTypeArray* numberOfClusters, vtkTable* curClusterElements,
238 vtkTable* newClusterElements, vtkIdTypeArray* startRunID, vtkIdTypeArray* endRunID);
239
245 virtual void CreateInitialClusterCenters(vtkIdType numToAllocate,
246 vtkIdTypeArray* numberOfClusters, vtkTable* inData, vtkTable* curClusterElements,
247 vtkTable* newClusterElements);
248
267 double Tolerance;
273
274private:
276 void operator=(const vtkKMeansStatistics&) = delete;
277};
278
279VTK_ABI_NAMESPACE_END
280#endif
maintain an unordered list of data objects
general representation of visualization data
dynamic, self-adjusting array of double
dynamic, self-adjusting array of vtkIdType
a simple class to control print indentation
Definition vtkIndent.h:108
dynamic, self-adjusting array of int
measure distance from k-means cluster centers
int MaxNumIterations
This is the maximum number of iterations allowed if the new cluster centers have not yet converged.
void SelectAssessFunctor(vtkTable *inData, vtkDataObject *inMeta, vtkStringArray *rowNames, AssessFunctor *&dfunc) override
Provide the appropriate assessment functor.
static vtkKMeansStatistics * New()
virtual void UpdateClusterCenters(vtkTable *newClusterElements, vtkTable *curClusterElements, vtkIdTypeArray *numMembershipChanges, vtkIdTypeArray *numDataElementsInCluster, vtkDoubleArray *error, vtkIdTypeArray *startRunID, vtkIdTypeArray *endRunID, vtkIntArray *computeRun)
Subroutine to update new cluster centers from the old centers.
char * KValuesArrayName
This is the name of the column that specifies the number of clusters in each run.
vtkKMeansDistanceFunctor * DistanceFunctor
This is the Distance functor.
bool SetParameter(const char *parameter, int index, vtkVariant value) override
A convenience method for setting properties by name.
void AppendAlgorithmParameters(std::string &algorithmParameters) const override
Provide a string that can be used to recreate an instance of this algorithm.
virtual vtkIdType GetTotalNumberOfObservations(vtkIdType numObservations)
Subroutine to get the total number of observations.
std::size_t ConsumeNextAlgorithmParameter(vtkStringToken parameterName, const std::string &algorithmParameters) override
Implement the inverse of AppendAlgorithmParameters(): given parameters, update this algorithm.
void PrintSelf(ostream &os, vtkIndent indent) override
Methods invoked by print to print information about the object including superclasses.
int DefaultNumberOfClusters
This is the default number of clusters used when the user does not provide initial cluster centers.
void Test(vtkTable *, vtkStatisticalModel *, vtkTable *) override
Execute the calculations required by the Test option.
void Derive(vtkStatisticalModel *) override
Execute the calculations required by the Derive option.
int InitializeDataAndClusterCenters(vtkTable *inParameters, vtkTable *inData, vtkTable *dataElements, vtkIdTypeArray *numberOfClusters, vtkTable *curClusterElements, vtkTable *newClusterElements, vtkIdTypeArray *startRunID, vtkIdTypeArray *endRunID)
Subroutine to initialize the cluster centers using those provided by the user in input port LEARN_PAR...
virtual void CreateInitialClusterCenters(vtkIdType numToAllocate, vtkIdTypeArray *numberOfClusters, vtkTable *inData, vtkTable *curClusterElements, vtkTable *newClusterElements)
Subroutine to initialize cluster centerss if not provided by the user.
~vtkKMeansStatistics() override
double Tolerance
This is the percentage of data elements that swap cluster IDs.
void Assess(vtkTable *, vtkStatisticalModel *, vtkTable *) override
Execute the calculations required by the Assess option.
bool Aggregate(vtkDataObjectCollection *, vtkStatisticalModel *) override
Given a collection of models, calculate aggregate model NB: not implemented.
void Learn(vtkTable *, vtkTable *, vtkStatisticalModel *) override
Execute the calculations required by the Learn option.
virtual void SetDistanceFunctor(vtkKMeansDistanceFunctor *)
Set the DistanceFunctor.
a base class for statistical modeling of other data
A base class for a functor that assesses data.
vtkStatisticsAlgorithm()
Return a new instance of a subclass named and configured by the algorithmParameters.
a vtkAbstractArray subclass for strings
Represent a string by its integer hash.
A table, which contains similar-typed columns of data.
Definition vtkTable.h:169
A type representing the union of many types.
Definition vtkVariant.h:162
int vtkIdType
Definition vtkType.h:368