vtkDiscreteMarchingCubes Class Reference

generate object boundaries from labelled volumes More...

#include <vtkDiscreteMarchingCubes.h>

Inheritance diagram for vtkDiscreteMarchingCubes:

Collaboration diagram for vtkDiscreteMarchingCubes:

Public Member Functions
virtual void	SetComputeAdjacentScalars (vtkTypeBool)
	Set/Get the computation of neighbouring voxel values.
virtual vtkTypeBool	GetComputeAdjacentScalars ()
	Set/Get the computation of neighbouring voxel values.
virtual void	ComputeAdjacentScalarsOn ()
	Set/Get the computation of neighbouring voxel values.
virtual void	ComputeAdjacentScalarsOff ()
	Set/Get the computation of neighbouring voxel values.
Public Member Functions inherited from vtkMarchingCubes
virtual vtkTypeBool	IsA (const char *type)
	Return 1 if this class is the same type of (or a subclass of) the named class.
vtkMarchingCubes *	NewInstance () const
void	PrintSelf (ostream &os, vtkIndent indent) override
	Methods invoked by print to print information about the object including superclasses.
void	SetValue (int i, double value)
	Set a particular contour value at contour number i.
double	GetValue (int i)
	Get the ith contour value.
double *	GetValues ()
	Get a pointer to an array of contour values.
void	GetValues (double *contourValues)
	Fill a supplied list with contour values.
void	SetNumberOfContours (int number)
	Set the number of contours to place into the list.
vtkIdType	GetNumberOfContours ()
	Get the number of contours in the list of contour values.
void	GenerateValues (int numContours, double range[2])
	Generate numContours equally spaced contour values between specified range.
void	GenerateValues (int numContours, double rangeStart, double rangeEnd)
	Generate numContours equally spaced contour values between specified range.
vtkMTimeType	GetMTime () override
	Return this object's modified time.
void	CreateDefaultLocator ()
	Create default locator.
virtual void	SetComputeNormals (vtkTypeBool)
	Set/Get the computation of normals.
virtual vtkTypeBool	GetComputeNormals ()
	Set/Get the computation of normals.
virtual void	ComputeNormalsOn ()
	Set/Get the computation of normals.
virtual void	ComputeNormalsOff ()
	Set/Get the computation of normals.
virtual void	SetComputeGradients (vtkTypeBool)
	Set/Get the computation of gradients.
virtual vtkTypeBool	GetComputeGradients ()
	Set/Get the computation of gradients.
virtual void	ComputeGradientsOn ()
	Set/Get the computation of gradients.
virtual void	ComputeGradientsOff ()
	Set/Get the computation of gradients.
virtual void	SetComputeScalars (vtkTypeBool)
	Set/Get the computation of scalars.
virtual vtkTypeBool	GetComputeScalars ()
	Set/Get the computation of scalars.
virtual void	ComputeScalarsOn ()
	Set/Get the computation of scalars.
virtual void	ComputeScalarsOff ()
	Set/Get the computation of scalars.
void	SetLocator (vtkIncrementalPointLocator *locator)
	override the default locator.
virtual vtkIncrementalPointLocator *	GetLocator ()
	override the default locator.
Public Member Functions inherited from vtkPolyDataAlgorithm
virtual vtkTypeBool	IsA (const char *type)
	Return 1 if this class is the same type of (or a subclass of) the named class.
vtkPolyDataAlgorithm *	NewInstance () const
void	PrintSelf (ostream &os, vtkIndent indent) override
	Methods invoked by print to print information about the object including superclasses.
vtkTypeBool	ProcessRequest (vtkInformation *, vtkInformationVector **, vtkInformationVector *) override
	see vtkAlgorithm for details
vtkDataObject *	GetInput ()
vtkDataObject *	GetInput (int port)
vtkPolyData *	GetPolyDataInput (int port)
vtkPolyData *	GetOutput ()
	Get the output data object for a port on this algorithm.
vtkPolyData *	GetOutput (int)
	Get the output data object for a port on this algorithm.
virtual void	SetOutput (vtkDataObject *d)
	Get the output data object for a port on this algorithm.
void	SetInputData (vtkDataObject *)
	Assign a data object as input.
void	SetInputData (int, vtkDataObject *)
	Assign a data object as input.
void	AddInputData (vtkDataObject *)
	Assign a data object as input.
void	AddInputData (int, vtkDataObject *)
	Assign a data object as input.
Public Member Functions inherited from vtkAlgorithm
virtual vtkTypeBool	IsA (const char *type)
	Return 1 if this class is the same type of (or a subclass of) the named class.
vtkAlgorithm *	NewInstance () const
void	PrintSelf (ostream &os, vtkIndent indent) override
	Methods invoked by print to print information about the object including superclasses.
vtkTypeBool	HasExecutive ()
	Check whether this algorithm has an assigned executive.
vtkExecutive *	GetExecutive ()
	Get this algorithm's executive.
virtual void	SetExecutive (vtkExecutive *executive)
	Set this algorithm's executive.
virtual vtkTypeBool	ProcessRequest (vtkInformation *request, vtkInformationVector **inInfo, vtkInformationVector *outInfo)
	Upstream/Downstream requests form the generalized interface through which executives invoke a algorithm's functionality.
vtkTypeBool	ProcessRequest (vtkInformation *request, vtkCollection *inInfo, vtkInformationVector *outInfo)
	Version of ProcessRequest() that is wrapped.
virtual int	ComputePipelineMTime (vtkInformation *request, vtkInformationVector **inInfoVec, vtkInformationVector *outInfoVec, int requestFromOutputPort, vtkMTimeType *mtime)
	A special version of ProcessRequest meant specifically for the pipeline modified time request.
virtual int	ModifyRequest (vtkInformation *request, int when)
	This method gives the algorithm a chance to modify the contents of a request before or after (specified in the when argument) it is forwarded.
vtkInformation *	GetInputPortInformation (int port)
	Get the information object associated with an input port.
vtkInformation *	GetOutputPortInformation (int port)
	Get the information object associated with an output port.
int	GetNumberOfInputPorts ()
	Get the number of input ports used by the algorithm.
int	GetNumberOfOutputPorts ()
	Get the number of output ports provided by the algorithm.
void	SetAbortExecuteAndUpdateTime ()
	Set AbortExecute Flag and update LastAbortTime.
void	UpdateProgress (double amount)
	Update the progress of the process object.
bool	CheckAbort ()
	Checks to see if this filter should abort.
vtkInformation *	GetInputArrayInformation (int idx)
	Get the info object for the specified input array to this algorithm.
void	RemoveAllInputs ()
	Remove all the input data.
vtkDataObject *	GetOutputDataObject (int port)
	Get the data object that will contain the algorithm output for the given port.
vtkDataObject *	GetInputDataObject (int port, int connection)
	Get the data object that will contain the algorithm input for the given port and given connection.
virtual void	RemoveInputConnection (int port, vtkAlgorithmOutput *input)
	Remove a connection from the given input port index.
virtual void	RemoveInputConnection (int port, int idx)
	Remove a connection given by index idx.
virtual void	RemoveAllInputConnections (int port)
	Removes all input connections.
virtual void	SetInputDataObject (int port, vtkDataObject *data)
	Sets the data-object as an input on the given port index.
virtual void	SetInputDataObject (vtkDataObject *data)
virtual void	AddInputDataObject (int port, vtkDataObject *data)
	Add the data-object as an input to this given port.
virtual void	AddInputDataObject (vtkDataObject *data)
vtkAlgorithmOutput *	GetOutputPort (int index)
	Get a proxy object corresponding to the given output port of this algorithm.
vtkAlgorithmOutput *	GetOutputPort ()
int	GetNumberOfInputConnections (int port)
	Get the number of inputs currently connected to a port.
int	GetTotalNumberOfInputConnections ()
	Get the total number of inputs for this algorithm.
vtkAlgorithmOutput *	GetInputConnection (int port, int index)
	Get the algorithm output port connected to an input port.
vtkAlgorithm *	GetInputAlgorithm (int port, int index, int &algPort)
	Returns the algorithm and the output port index of that algorithm connected to a port-index pair.
vtkAlgorithm *	GetInputAlgorithm (int port, int index)
	Returns the algorithm connected to a port-index pair.
vtkAlgorithm *	GetInputAlgorithm ()
	Equivalent to GetInputAlgorithm(0, 0).
vtkExecutive *	GetInputExecutive (int port, int index)
	Returns the executive associated with a particular input connection.
vtkExecutive *	GetInputExecutive ()
	Equivalent to GetInputExecutive(0, 0)
vtkInformation *	GetInputInformation (int port, int index)
	Return the information object that is associated with a particular input connection.
vtkInformation *	GetInputInformation ()
	Equivalent to GetInputInformation(0, 0)
vtkInformation *	GetOutputInformation (int port)
	Return the information object that is associated with a particular output port.
virtual vtkTypeBool	Update (int port, vtkInformationVector *requests)
	This method enables the passing of data requests to the algorithm to be used during execution (in addition to bringing a particular port up-to-date).
virtual vtkTypeBool	Update (vtkInformation *requests)
	Convenience method to update an algorithm after passing requests to its first output port.
virtual int	UpdatePiece (int piece, int numPieces, int ghostLevels, const int extents[6]=nullptr)
	Convenience method to update an algorithm after passing requests to its first output port.
virtual VTK_UNBLOCKTHREADS int	UpdateExtent (const int extents[6])
	Convenience method to update an algorithm after passing requests to its first output port.
virtual VTK_UNBLOCKTHREADS int	UpdateTimeStep (double time, int piece=-1, int numPieces=1, int ghostLevels=0, const int extents[6]=nullptr)
	Convenience method to update an algorithm after passing requests to its first output port.
virtual VTK_UNBLOCKTHREADS void	UpdateInformation ()
	Bring the algorithm's information up-to-date.
virtual void	UpdateDataObject ()
	Create output object(s).
virtual void	PropagateUpdateExtent ()
	Propagate meta-data upstream.
virtual VTK_UNBLOCKTHREADS void	UpdateWholeExtent ()
	Bring this algorithm's outputs up-to-date.
void	ConvertTotalInputToPortConnection (int ind, int &port, int &conn)
	Convenience routine to convert from a linear ordering of input connections to a port/connection pair.
void	RemoveNoPriorTemporalAccessInformationKey ()
	Removes any information key vtkStreamingDemandDrivenPipeline::NO_PRIOR_TEMPORAL_ACCESS() to all output ports of this vtkAlgorithm.
virtual vtkInformation *	GetInformation ()
	Set/Get the information object associated with this algorithm.
virtual void	SetInformation (vtkInformation *)
	Set/Get the information object associated with this algorithm.
bool	UsesGarbageCollector () const override
	Participate in garbage collection.
virtual void	SetAbortExecute (vtkTypeBool)
	Set/Get the AbortExecute flag for the process object.
virtual vtkTypeBool	GetAbortExecute ()
	Set/Get the AbortExecute flag for the process object.
virtual void	AbortExecuteOn ()
	Set/Get the AbortExecute flag for the process object.
virtual void	AbortExecuteOff ()
	Set/Get the AbortExecute flag for the process object.
virtual double	GetProgress ()
	Get the execution progress of a process object.
void	SetContainerAlgorithm (vtkAlgorithm *containerAlg)
	Set/get a Container algorithm for this algorithm.
vtkAlgorithm *	GetContainerAlgorithm ()
	Set/get a Container algorithm for this algorithm.
virtual void	SetAbortOutput (bool)
	Set/Get an internal variable used to communicate between the algorithm and executive.
virtual bool	GetAbortOutput ()
	Set/Get an internal variable used to communicate between the algorithm and executive.
void	SetProgressShiftScale (double shift, double scale)
	Specify the shift and scale values to use to apply to the progress amount when UpdateProgress is called.
virtual double	GetProgressShift ()
	Specify the shift and scale values to use to apply to the progress amount when UpdateProgress is called.
virtual double	GetProgressScale ()
	Specify the shift and scale values to use to apply to the progress amount when UpdateProgress is called.
void	SetProgressText (const char *ptext)
	Set the current text message associated with the progress state.
virtual char *	GetProgressText ()
	Set the current text message associated with the progress state.
virtual unsigned long	GetErrorCode ()
	The error code contains a possible error that occurred while reading or writing the file.
void	SetInputArrayToProcess (const char *name, int fieldAssociation)
	Set the input data arrays that this algorithm will process.
virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, const char *name)
	Set the input data arrays that this algorithm will process.
virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, int fieldAttributeType)
	Set the input data arrays that this algorithm will process.
virtual void	SetInputArrayToProcess (int idx, vtkInformation *info)
	Set the input data arrays that this algorithm will process.
virtual void	SetInputArrayToProcess (int idx, int port, int connection, const char *fieldAssociation, const char *attributeTypeorName)
	Set the input data arrays that this algorithm will process.
virtual void	SetInputConnection (int port, vtkAlgorithmOutput *input)
	Set the connection for the given input port index.
virtual void	SetInputConnection (vtkAlgorithmOutput *input)
	Set the connection for the given input port index.
virtual void	AddInputConnection (int port, vtkAlgorithmOutput *input)
	Add a connection to the given input port index.
virtual void	AddInputConnection (vtkAlgorithmOutput *input)
	Add a connection to the given input port index.
virtual VTK_UNBLOCKTHREADS void	Update (int port)
	Bring this algorithm's outputs up-to-date.
virtual VTK_UNBLOCKTHREADS void	Update ()
	Bring this algorithm's outputs up-to-date.
virtual void	SetReleaseDataFlag (vtkTypeBool)
	Turn release data flag on or off for all output ports.
virtual vtkTypeBool	GetReleaseDataFlag ()
	Turn release data flag on or off for all output ports.
void	ReleaseDataFlagOn ()
	Turn release data flag on or off for all output ports.
void	ReleaseDataFlagOff ()
	Turn release data flag on or off for all output ports.
int	UpdateExtentIsEmpty (vtkInformation *pinfo, vtkDataObject *output)
	This detects when the UpdateExtent will generate no data This condition is satisfied when the UpdateExtent has zero volume (0,-1,...) or the UpdateNumberOfPieces is 0.
int	UpdateExtentIsEmpty (vtkInformation *pinfo, int extentType)
	This detects when the UpdateExtent will generate no data This condition is satisfied when the UpdateExtent has zero volume (0,-1,...) or the UpdateNumberOfPieces is 0.
int *	GetUpdateExtent ()
	These functions return the update extent for output ports that use 3D extents.
int *	GetUpdateExtent (int port)
	These functions return the update extent for output ports that use 3D extents.
void	GetUpdateExtent (int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
	These functions return the update extent for output ports that use 3D extents.
void	GetUpdateExtent (int port, int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
	These functions return the update extent for output ports that use 3D extents.
void	GetUpdateExtent (int extent[6])
	These functions return the update extent for output ports that use 3D extents.
void	GetUpdateExtent (int port, int extent[6])
	These functions return the update extent for output ports that use 3D extents.
int	GetUpdatePiece ()
	These functions return the update extent for output ports that use piece extents.
int	GetUpdatePiece (int port)
	These functions return the update extent for output ports that use piece extents.
int	GetUpdateNumberOfPieces ()
	These functions return the update extent for output ports that use piece extents.
int	GetUpdateNumberOfPieces (int port)
	These functions return the update extent for output ports that use piece extents.
int	GetUpdateGhostLevel ()
	These functions return the update extent for output ports that use piece extents.
int	GetUpdateGhostLevel (int port)
	These functions return the update extent for output ports that use piece extents.
void	SetProgressObserver (vtkProgressObserver *)
	If an ProgressObserver is set, the algorithm will report progress through it rather than directly.
virtual vtkProgressObserver *	GetProgressObserver ()
	If an ProgressObserver is set, the algorithm will report progress through it rather than directly.
void	SetNoPriorTemporalAccessInformationKey (int key)
	Set to all output ports of this algorithm the information key vtkStreamingDemandDrivenPipeline::NO_PRIOR_TEMPORAL_ACCESS().
void	SetNoPriorTemporalAccessInformationKey ()
	Set to all output ports of this algorithm the information key vtkStreamingDemandDrivenPipeline::NO_PRIOR_TEMPORAL_ACCESS().
Public Member Functions inherited from vtkObject
	vtkBaseTypeMacro (vtkObject, vtkObjectBase)
virtual void	DebugOn ()
	Turn debugging output on.
virtual void	DebugOff ()
	Turn debugging output off.
bool	GetDebug ()
	Get the value of the debug flag.
void	SetDebug (bool debugFlag)
	Set the value of the debug flag.
virtual void	Modified ()
	Update the modification time for this object.
virtual vtkMTimeType	GetMTime ()
	Return this object's modified time.
void	PrintSelf (ostream &os, vtkIndent indent) override
	Methods invoked by print to print information about the object including superclasses.
void	RemoveObserver (unsigned long tag)
void	RemoveObservers (unsigned long event)
void	RemoveObservers (const char *event)
void	RemoveAllObservers ()
vtkTypeBool	HasObserver (unsigned long event)
vtkTypeBool	HasObserver (const char *event)
vtkTypeBool	InvokeEvent (unsigned long event)
vtkTypeBool	InvokeEvent (const char *event)
std::string	GetObjectDescription () const override
	The object description printed in messages and PrintSelf output.
unsigned long	AddObserver (unsigned long event, vtkCommand *, float priority=0.0f)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
unsigned long	AddObserver (const char *event, vtkCommand *, float priority=0.0f)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
vtkCommand *	GetCommand (unsigned long tag)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
void	RemoveObserver (vtkCommand *)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
void	RemoveObservers (unsigned long event, vtkCommand *)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
void	RemoveObservers (const char *event, vtkCommand *)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
vtkTypeBool	HasObserver (unsigned long event, vtkCommand *)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
vtkTypeBool	HasObserver (const char *event, vtkCommand *)
	Allow people to add/remove/invoke observers (callbacks) to any VTK object.
template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, void(T::*callback)(), float priority=0.0f)
	Overloads to AddObserver that allow developers to add class member functions as callbacks for events.
template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, void(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
	Overloads to AddObserver that allow developers to add class member functions as callbacks for events.
template<class U , class T >
unsigned long	AddObserver (unsigned long event, U observer, bool(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
	Allow user to set the AbortFlagOn() with the return value of the callback method.
vtkTypeBool	InvokeEvent (unsigned long event, void *callData)
	This method invokes an event and return whether the event was aborted or not.
vtkTypeBool	InvokeEvent (const char *event, void *callData)
	This method invokes an event and return whether the event was aborted or not.
virtual void	SetObjectName (const std::string &objectName)
	Set/get the name of this object for reporting purposes.
virtual std::string	GetObjectName () const
	Set/get the name of this object for reporting purposes.
Public Member Functions inherited from vtkObjectBase
const char *	GetClassName () const
	Return the class name as a string.
virtual std::string	GetObjectDescription () const
	The object description printed in messages and PrintSelf output.
virtual vtkTypeBool	IsA (const char *name)
	Return 1 if this class is the same type of (or a subclass of) the named class.
virtual vtkIdType	GetNumberOfGenerationsFromBase (const char *name)
	Given the name of a base class of this class type, return the distance of inheritance between this class type and the named class (how many generations of inheritance are there between this class and the named class).
virtual void	Delete ()
	Delete a VTK object.
virtual void	FastDelete ()
	Delete a reference to this object.
void	InitializeObjectBase ()
void	Print (ostream &os)
	Print an object to an ostream.
void	Register (vtkObjectBase *o)
	Increase the reference count (mark as used by another object).
virtual void	UnRegister (vtkObjectBase *o)
	Decrease the reference count (release by another object).
int	GetReferenceCount ()
	Return the current reference count of this object.
void	SetReferenceCount (int)
	Sets the reference count.
bool	GetIsInMemkind () const
	A local state flag that remembers whether this object lives in the normal or extended memory space.
virtual void	PrintHeader (ostream &os, vtkIndent indent)
	Methods invoked by print to print information about the object including superclasses.
virtual void	PrintTrailer (ostream &os, vtkIndent indent)
	Methods invoked by print to print information about the object including superclasses.

Protected Member Functions
	vtkDiscreteMarchingCubes ()
	~vtkDiscreteMarchingCubes () override
int	RequestData (vtkInformation *, vtkInformationVector **, vtkInformationVector *) override
	This is called by the superclass.
Protected Member Functions inherited from vtkMarchingCubes
virtual vtkObjectBase *	NewInstanceInternal () const
	vtkMarchingCubes ()
	~vtkMarchingCubes () override
int	RequestData (vtkInformation *, vtkInformationVector **, vtkInformationVector *) override
	This is called by the superclass.
int	FillInputPortInformation (int port, vtkInformation *info) override
	Fill the input port information objects for this algorithm.
Protected Member Functions inherited from vtkPolyDataAlgorithm
virtual vtkObjectBase *	NewInstanceInternal () const
	vtkPolyDataAlgorithm ()
	~vtkPolyDataAlgorithm () override
virtual int	RequestInformation (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector)
virtual int	RequestData (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector)
	This is called by the superclass.
virtual int	RequestUpdateExtent (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
	This is called by the superclass.
virtual int	RequestUpdateTime (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
	This is called by the superclass.
int	FillOutputPortInformation (int port, vtkInformation *info) override
	Fill the output port information objects for this algorithm.
int	FillInputPortInformation (int port, vtkInformation *info) override
	Fill the input port information objects for this algorithm.
Protected Member Functions inherited from vtkAlgorithm
virtual vtkObjectBase *	NewInstanceInternal () const
	vtkAlgorithm ()
	~vtkAlgorithm () override
bool	CheckUpstreamAbort ()
	Checks to see if an upstream filter has been aborted.
virtual int	FillInputPortInformation (int port, vtkInformation *info)
	Fill the input port information objects for this algorithm.
virtual int	FillOutputPortInformation (int port, vtkInformation *info)
	Fill the output port information objects for this algorithm.
virtual void	SetNumberOfInputPorts (int n)
	Set the number of input ports used by the algorithm.
virtual void	SetNumberOfOutputPorts (int n)
	Set the number of output ports provided by the algorithm.
int	InputPortIndexInRange (int index, const char *action)
int	OutputPortIndexInRange (int index, const char *action)
int	GetInputArrayAssociation (int idx, vtkInformationVector **inputVector)
	Get the association of the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass.
vtkInformation *	GetInputArrayFieldInformation (int idx, vtkInformationVector **inputVector)
	This method takes in an index (as specified in SetInputArrayToProcess) and a pipeline information vector.
virtual vtkExecutive *	CreateDefaultExecutive ()
	Create a default executive.
void	ReportReferences (vtkGarbageCollector *) override
virtual void	SetNthInputConnection (int port, int index, vtkAlgorithmOutput *input)
	Replace the Nth connection on the given input port.
virtual void	SetNumberOfInputConnections (int port, int n)
	Set the number of input connections on the given input port.
void	SetInputDataInternal (int port, vtkDataObject *input)
	These methods are used by subclasses to implement methods to set data objects directly as input.
void	AddInputDataInternal (int port, vtkDataObject *input)
int	GetInputArrayAssociation (int idx, int connection, vtkInformationVector **inputVector)
	Filters that have multiple connections on one port can use this signature.
int	GetInputArrayAssociation (int idx, vtkDataObject *input)
	Filters that have multiple connections on one port can use this signature.
vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector)
	Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass.
vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
	Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass.
vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
	Filters that have multiple connections on one port can use this signature.
vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
	Filters that have multiple connections on one port can use this signature.
vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input)
	Filters that have multiple connections on one port can use this signature.
vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input, int &association)
	Filters that have multiple connections on one port can use this signature.
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector)
	Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass.
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
	Get the actual data array for the input array specified by idx, this is only reasonable during the REQUEST_DATA pass.
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
	Filters that have multiple connections on one port can use this signature.
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
	Filters that have multiple connections on one port can use this signature.
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input)
	Filters that have multiple connections on one port can use this signature.
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input, int &association)
	Filters that have multiple connections on one port can use this signature.
virtual void	SetErrorCode (unsigned long)
	The error code contains a possible error that occurred while reading or writing the file.
Protected Member Functions inherited from vtkObject
	vtkObject ()
	~vtkObject () override
void	RegisterInternal (vtkObjectBase *, vtkTypeBool check) override
void	UnRegisterInternal (vtkObjectBase *, vtkTypeBool check) override
void	InternalGrabFocus (vtkCommand *mouseEvents, vtkCommand *keypressEvents=nullptr)
	These methods allow a command to exclusively grab all events.
void	InternalReleaseFocus ()
	These methods allow a command to exclusively grab all events.
Protected Member Functions inherited from vtkObjectBase
	vtkObjectBase ()
virtual	~vtkObjectBase ()
virtual void	RegisterInternal (vtkObjectBase *, vtkTypeBool check)
virtual void	UnRegisterInternal (vtkObjectBase *, vtkTypeBool check)
virtual void	ReportReferences (vtkGarbageCollector *)
virtual void	ObjectFinalize ()
	vtkObjectBase (const vtkObjectBase &)
void	operator= (const vtkObjectBase &)

Protected Attributes
vtkTypeBool	ComputeAdjacentScalars
Protected Attributes inherited from vtkMarchingCubes
vtkContourValues *	ContourValues
vtkTypeBool	ComputeNormals
vtkTypeBool	ComputeGradients
vtkTypeBool	ComputeScalars
vtkIncrementalPointLocator *	Locator
Protected Attributes inherited from vtkAlgorithm
vtkTimeStamp	LastAbortCheckTime
vtkInformation *	Information
double	Progress
char *	ProgressText
vtkProgressObserver *	ProgressObserver
unsigned long	ErrorCode
	The error code contains a possible error that occurred while reading or writing the file.
Protected Attributes inherited from vtkObject
bool	Debug
vtkTimeStamp	MTime
vtkSubjectHelper *	SubjectHelper
std::string	ObjectName
Protected Attributes inherited from vtkObjectBase
std::atomic< int32_t >	ReferenceCount
vtkWeakPointerBase **	WeakPointers
typedef vtkMarchingCubes	Superclass
	Standard methods for instantiation, obtaining type information, and printing the state of an object.
static vtkDiscreteMarchingCubes *	New ()
	Standard methods for instantiation, obtaining type information, and printing the state of an object.
static vtkTypeBool	IsTypeOf (const char *type)
	Standard methods for instantiation, obtaining type information, and printing the state of an object.
static vtkDiscreteMarchingCubes *	SafeDownCast (vtkObjectBase *o)
	Standard methods for instantiation, obtaining type information, and printing the state of an object.
virtual vtkTypeBool	IsA (const char *type)
	Standard methods for instantiation, obtaining type information, and printing the state of an object.
vtkDiscreteMarchingCubes *	NewInstance () const
	Standard methods for instantiation, obtaining type information, and printing the state of an object.
void	PrintSelf (ostream &os, vtkIndent indent) override
	Standard methods for instantiation, obtaining type information, and printing the state of an object.
virtual vtkObjectBase *	NewInstanceInternal () const
	Standard methods for instantiation, obtaining type information, and printing the state of an object.

Additional Inherited Members
Public Types inherited from vtkMarchingCubes
typedef vtkPolyDataAlgorithm	Superclass
Public Types inherited from vtkPolyDataAlgorithm
typedef vtkAlgorithm	Superclass
Public Types inherited from vtkAlgorithm
enum	DesiredOutputPrecision { SINGLE_PRECISION , DOUBLE_PRECISION , DEFAULT_PRECISION }
	Values used for setting the desired output precision for various algorithms. More...
typedef vtkObject	Superclass
Static Public Member Functions inherited from vtkMarchingCubes
static vtkMarchingCubes *	New ()
static vtkTypeBool	IsTypeOf (const char *type)
static vtkMarchingCubes *	SafeDownCast (vtkObjectBase *o)
Static Public Member Functions inherited from vtkPolyDataAlgorithm
static vtkPolyDataAlgorithm *	New ()
static vtkTypeBool	IsTypeOf (const char *type)
static vtkPolyDataAlgorithm *	SafeDownCast (vtkObjectBase *o)
Static Public Member Functions inherited from vtkAlgorithm
static vtkAlgorithm *	New ()
static vtkTypeBool	IsTypeOf (const char *type)
static vtkAlgorithm *	SafeDownCast (vtkObjectBase *o)
static vtkInformationIntegerKey *	INPUT_IS_OPTIONAL ()
	Keys used to specify input port requirements.
static vtkInformationIntegerKey *	INPUT_IS_REPEATABLE ()
static vtkInformationInformationVectorKey *	INPUT_REQUIRED_FIELDS ()
static vtkInformationStringVectorKey *	INPUT_REQUIRED_DATA_TYPE ()
static vtkInformationInformationVectorKey *	INPUT_ARRAYS_TO_PROCESS ()
static vtkInformationIntegerKey *	INPUT_PORT ()
static vtkInformationIntegerKey *	INPUT_CONNECTION ()
static vtkInformationIntegerKey *	CAN_PRODUCE_SUB_EXTENT ()
	This key tells the executive that a particular output port is capable of producing an arbitrary subextent of the whole extent.
static vtkInformationIntegerKey *	CAN_HANDLE_PIECE_REQUEST ()
	Key that tells the pipeline that a particular algorithm can or cannot handle piece request.
static vtkInformationIntegerKey *	ABORTED ()
static void	SetDefaultExecutivePrototype (vtkExecutive *proto)
	If the DefaultExecutivePrototype is set, a copy of it is created in CreateDefaultExecutive() using NewInstance().
Static Public Member Functions inherited from vtkObject
static vtkObject *	New ()
	Create an object with Debug turned off, modified time initialized to zero, and reference counting on.
static void	BreakOnError ()
	This method is called when vtkErrorMacro executes.
static void	SetGlobalWarningDisplay (vtkTypeBool val)
	This is a global flag that controls whether any debug, warning or error messages are displayed.
static void	GlobalWarningDisplayOn ()
	This is a global flag that controls whether any debug, warning or error messages are displayed.
static void	GlobalWarningDisplayOff ()
	This is a global flag that controls whether any debug, warning or error messages are displayed.
static vtkTypeBool	GetGlobalWarningDisplay ()
	This is a global flag that controls whether any debug, warning or error messages are displayed.
Static Public Member Functions inherited from vtkObjectBase
static vtkTypeBool	IsTypeOf (const char *name)
	Return 1 if this class type is the same type of (or a subclass of) the named class.
static vtkIdType	GetNumberOfGenerationsFromBaseType (const char *name)
	Given a the name of a base class of this class type, return the distance of inheritance between this class type and the named class (how many generations of inheritance are there between this class and the named class).
static vtkObjectBase *	New ()
	Create an object with Debug turned off, modified time initialized to zero, and reference counting on.
static void	SetMemkindDirectory (const char *directoryname)
	The name of a directory, ideally mounted -o dax, to memory map an extended memory space within.
static bool	GetUsingMemkind ()
	A global state flag that controls whether vtkObjects are constructed in the usual way (the default) or within the extended memory space.
Public Attributes inherited from vtkAlgorithm
std::atomic< vtkTypeBool >	AbortExecute
Static Protected Member Functions inherited from vtkAlgorithm
static vtkInformationIntegerKey *	PORT_REQUIREMENTS_FILLED ()
Static Protected Member Functions inherited from vtkObjectBase
static vtkMallocingFunction	GetCurrentMallocFunction ()
static vtkReallocingFunction	GetCurrentReallocFunction ()
static vtkFreeingFunction	GetCurrentFreeFunction ()
static vtkFreeingFunction	GetAlternateFreeFunction ()
Static Protected Attributes inherited from vtkAlgorithm
static vtkTimeStamp	LastAbortTime
static vtkExecutive *	DefaultExecutivePrototype

Detailed Description

generate object boundaries from labelled volumes

This filter extracts object boundaries from label maps (label maps are volumes in which each voxel is labeled according to the region in which it is contained). The filter takes as input a volume (e.g., 3D structured point set) of segmentation labels and generates on output one or more models representing the boundaries between the specified label and the adjacent structures. One or more label values must be specified to generate the models. The boundary positions are always defined to be half-way between adjacent voxels. This filter works best with integral scalar values.

If ComputeScalars is on (the default), each output cell will have cell data that corresponding to the scalar value (segmentation label) of the corresponding cube. Note that this differs from vtkMarchingCubes, which stores the scalar value as point data. The rationale for this difference is that cell vertices may be shared between multiple cells. This also means that the resultant polydata may be non-manifold (cell faces may be coincident). To further process the polydata, users should either: 1) extract cells that have a common scalar value using vtkThreshold, or 2) process the data with filters that can handle non-manifold polydata (e.g. vtkWindowedSincPolyDataFilter). Also note, Normals and Gradients are not computed.

If ComputeAdjacentScalars is on (default is off), each output point will have point data that contains the label value of the neighbouring voxel. This allows to remove regions of the resulting vtkPolyData that are adjacent to specific label meshes. For example, if the input is a label image that was created by running a watershed transformation on a distance map followed by masking with the original binary segmentation. For further details and images see the VTK Journal paper: "Providing values of adjacent voxel with vtkDiscreteMarchingCubes" by Roman Grothausmann: http://hdl.handle.net/10380/3559 http://www.vtkjournal.org/browse/publication/975

Warning

This filter is specialized to volumes. If you are interested in contouring other types of data, use the general vtkContourFilter. If you want to contour an image (i.e., a volume slice), use vtFlyingEdges2D or vtkMarchingSquares.

See also vtkPackLabels which is a utility class for renumbering the labels found in the input segmentation mask to contiguous forms of smaller type.

See also

vtkSurfaceNets3D vtkDiscreteFlyingEdges3D vtkSurfaceNets2D vtkContourFilter vtkSliceCubes vtkMarchingSquares vtkDividingCubes vtkPackLabels

Examples:

vtkDiscreteMarchingCubes (Examples)

Online Examples:

GenerateModelsFromLabels

DiscreteMarchingCubes

SmoothDiscreteMarchingCubes

Tests:

vtkDiscreteMarchingCubes (Tests)

Definition at line 118 of file vtkDiscreteMarchingCubes.h.

Member Typedef Documentation

Superclass

typedef vtkMarchingCubes vtkDiscreteMarchingCubes::Superclass

Standard methods for instantiation, obtaining type information, and printing the state of an object.

Definition at line 127 of file vtkDiscreteMarchingCubes.h.

Constructor & Destructor Documentation

vtkDiscreteMarchingCubes()

vtkDiscreteMarchingCubes::vtkDiscreteMarchingCubes ( )

protected

~vtkDiscreteMarchingCubes()

vtkDiscreteMarchingCubes::~vtkDiscreteMarchingCubes ( )

overrideprotected

Member Function Documentation

New()

static vtkDiscreteMarchingCubes * vtkDiscreteMarchingCubes::New ( )

static

Standard methods for instantiation, obtaining type information, and printing the state of an object.

IsTypeOf()

static vtkTypeBool vtkDiscreteMarchingCubes::IsTypeOf ( const char *  type )

static

Standard methods for instantiation, obtaining type information, and printing the state of an object.

IsA()

virtual vtkTypeBool vtkDiscreteMarchingCubes::IsA ( const char *  type )

virtual

Standard methods for instantiation, obtaining type information, and printing the state of an object.

Reimplemented from vtkMarchingCubes.

SafeDownCast()

static vtkDiscreteMarchingCubes * vtkDiscreteMarchingCubes::SafeDownCast ( vtkObjectBase *  o )

static

Standard methods for instantiation, obtaining type information, and printing the state of an object.

NewInstanceInternal()

virtual vtkObjectBase * vtkDiscreteMarchingCubes::NewInstanceInternal ( ) const

protectedvirtual

Standard methods for instantiation, obtaining type information, and printing the state of an object.

Reimplemented from vtkMarchingCubes.

NewInstance()

vtkDiscreteMarchingCubes * vtkDiscreteMarchingCubes::NewInstance

(

)

const

Standard methods for instantiation, obtaining type information, and printing the state of an object.

PrintSelf()

void vtkDiscreteMarchingCubes::PrintSelf ( ostream &  os, vtkIndent  indent  )

overridevirtual

Standard methods for instantiation, obtaining type information, and printing the state of an object.

Reimplemented from vtkAlgorithm.

SetComputeAdjacentScalars()

virtual void vtkDiscreteMarchingCubes::SetComputeAdjacentScalars ( vtkTypeBool  )

virtual

Set/Get the computation of neighbouring voxel values.

GetComputeAdjacentScalars()

virtual vtkTypeBool vtkDiscreteMarchingCubes::GetComputeAdjacentScalars ( )

virtual

Set/Get the computation of neighbouring voxel values.

ComputeAdjacentScalarsOn()

virtual void vtkDiscreteMarchingCubes::ComputeAdjacentScalarsOn ( )

virtual

Set/Get the computation of neighbouring voxel values.

ComputeAdjacentScalarsOff()

virtual void vtkDiscreteMarchingCubes::ComputeAdjacentScalarsOff ( )

virtual

Set/Get the computation of neighbouring voxel values.

RequestData()

int vtkDiscreteMarchingCubes::RequestData ( vtkInformation *  request, vtkInformationVector **  inputVector, vtkInformationVector *  outputVector  )

overrideprotectedvirtual

This is called by the superclass.

This is the method you should override.

Reimplemented from vtkPolyDataAlgorithm.

Member Data Documentation

ComputeAdjacentScalars

vtkTypeBool vtkDiscreteMarchingCubes::ComputeAdjacentScalars

protected

Definition at line 145 of file vtkDiscreteMarchingCubes.h.

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The documentation for this class was generated from the following file:

• Filters/General/vtkDiscreteMarchingCubes.h